Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0979 ATGGAATACCTGAACTTGAGTTCATACCATACCACTTCAAAGTGGGTGTCCACGGTAGCTAGCATATGGATTCAGTGCACAAGTGGGTCCCTCTATACTTTCTCTATCTACTCCGAAACACTCAAGTCAACTCAGCACTATGATCAGTCAACGCTTGACCTTGTCTCTGTTTTCAAGGATATCGGAGCCAACGTTGGTGTTCTTGCTGGTCTCTTATACGACGTCGTTTCACGCACAACAAAGCATGGACCTTGCTTTGTGCACTTATTGGGCTCTGTTTTTTGCTTCTTGGGCTATTTCCTCATGTGGGCTACCGTCGCCGGCGTTATTCCGCCGGTGCCGGTTCCGGTGATGTGTTTGTTCATGTTCTTGACTGCACATTCTCAGACATACTTCAACACTTCGAATGTTGTCACTGGTGTGCATAATTTTCCTTTCTTTAGTGGAACCATTGTGGGAATTATGAAGGGGTTTCTTGGTCTCAGTGGAGCAATATTAATTCAAGTGTATCTGACTATCTTAAACAACAAGCCCACGGCATATCTTCTGATGCTAGCCCTTTTACCACCTATAAATACTTTGCTACTAATGTGGTTTGTAAGAATCGACAACAATCGAGAGGGAGATGAAGGGACATATCTAAATATATTTTCTTTGATGGCTCTGGTCATTGCTGCTTATCTTATGGTTGTTATAATCCTGAATAATATCATTAGTCTGCCGTTATTGGTTCGCATCTTTGTATTAATTGTGCTTATGATGTTGCTAGCATCACTTCTTTGCATTGCATTTAAAGCCCTAGAAAGAAGTTCCAGTGGTACTTCAGAAACTTTTCTTGATGAGAGTTCCCAACAAATTGTTGAGCCTAGCTTCCATGAAACTGAGAAGATGGATGCAAGACAAGATTCTGACACCTACCCTATGCTTGATACGAACAATCATAGGAGGTTGCAACCGGGAGAAAACCAAAATCTTTTCCAAGCAGCGCAAGCTTTTAACTTTTGGATTTTGTTTGTTTGTATGTCATGTGGTATGGGGTCCGGACTCGCAACAGTTAATAATATCGGCCAAATAGGGGCATCACTTGGTTATACCAGACGCGAAACTGGATCCTTGGTTTCTTTGTGGAGCATTTGGAATTTTCTTGGTCGCTTCGGAGCTGGTTATGTATCAGATTACTTTTTACACACAAGAGGATGGGCAAGACCATTATTTATGGTCGCCACTTTAACGATCATGAGCATCGGGCATGTGATGATTGCTTCCGGACTGCCAGGTGCTCTATATGTTGGTTCAATATTGGTGGGTATTTGTTATGGCTCCCAGTGGTCCCTAATGCCCACAATCACTTCTGAGATATTTGGTGTGGAACATATGGGCAGCATATTCAACACCATTAGTGTAGCGAGTCCGGTAGGATCTTATATTTTCTCGGTAAGAGTCGTTGGGTATATATATGACAAAGAAGCATCAGGAGGAAATACATGCACTGGTGCTCATTGTTTTATGTTTTCTTTCCTTATAATGGCATCTGCTACACTTCTGGCTTCTCTGGCAGCTTTAGGTTTGTTTTTCCGGACGAAGAACTTCTATAGTCAGGTTGTGCTGAGAAGAATTCAAAATTTTCTGTGA 1632 0.421 MEYLNLSSYHTTSKWVSTVASIWIQCTSGSLYTFSIYSETLKSTQHYDQSTLDLVSVFKDIGANVGVLAGLLYDVVSRTTKHGPCFVHLLGSVFCFLGYFLMWATVAGVIPPVPVPVMCLFMFLTAHSQTYFNTSNVVTGVHNFPFFSGTIVGIMKGFLGLSGAILIQVYLTILNNKPTAYLLMLALLPPINTLLLMWFVRIDNNREGDEGTYLNIFSLMALVIAAYLMVVIILNNIISLPLLVRIFVLIVLMMLLASLLCIAFKALERSSSGTSETFLDESSQQIVEPSFHETEKMDARQDSDTYPMLDTNNHRRLQPGENQNLFQAAQAFNFWILFVCMSCGMGSGLATVNNIGQIGASLGYTRRETGSLVSLWSIWNFLGRFGAGYVSDYFLHTRGWARPLFMVATLTIMSIGHVMIASGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVEHMGSIFNTISVASPVGSYIFSVRVVGYIYDKEASGGNTCTGAHCFMFSFLIMASATLLASLAALGLFFRTKNFYSQVVLRRIQNFL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0979 543 CDD MFS_Mch1p_like 13 509 - -
Lal17g0979 543 Pfam Nodulin-like 14 263 IPR010658 -
Lal17g0979 543 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 11 541 - -
Lal17g0979 543 Pfam Major Facilitator Superfamily 339 527 IPR011701 GO:0022857|GO:0055085
Lal17g0979 543 Gene3D MFS general substrate transporter like domains 323 534 IPR036259 -
Lal17g0979 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 541 - -
Lal17g0979 543 SUPERFAMILY MFS general substrate transporter 214 529 IPR036259 -
Lal17g0979 543 SUPERFAMILY MFS general substrate transporter 18 203 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0979 Lal-Chr17 7979093 7982938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0979 13 541 Nodulin-like Gene Family AT1G74780 55.370 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0979 - - lja:Lj1g3v0437880.2 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0979 17 7979093 7982938 Lal17g0979 17 7979093 7982938 ECH