Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0976 ATGTCTCAACGATCTTCTCCGCTTCCAACCGCCGAACCCTCTCACCCACCATCGCCGGAACCCGATTCCCATAAGGAACAGCCCACCACCACCGCCGCCGCCGCCGTCGCCGCCGATGATCCTCCTGCAACCACCCGTAGTAACCGCCCATCCCGGGCGTGCACCCTTCGCGCCGCTGCCCGCCTCCGTTCAGCGTCGCAGCAGGAGGCAGCAGCGATCAAGCGCCGGCCTAAAGCCGCCAAGAAGGAGCAGCAGAGGCATCAGGAGGATTCGCCACCGCCATCGCCGCGGCAGCAGCAATGCAGCAAGATCGTGACGCCGCTGGTGGAACCGCCCCCGCCGTCGCTGTTGCCACGGTGGAATCTCCGGTCGATGTGGGAGTTAGCTTCCGTACTAAATTTCTTGCATCTATTTAGGCCTATTTTGAATATATCAGTAGAATTCTCAGCTGAAGAGTTCGAAACAGCACTTCTTACCCCTAATGATACTTTGGGTGACATACATATGCCTTTGTTAAAGGCAATCCCTCCCATTACGCGAATGGCACTCTCACATGATACTTGGATAACTGTATTATGCAGAAAACTGAGAGATTGGTGGTACTGGGTTGCTAATGGGGATATGCCAATTGTTGCTTCACATGGAGTGGAGATTGAAGTATATAAATCACTTGATCCTGGGGTCCGTGTAGTCATCTTAAAAGCATTATGTGACATTCGTGCTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAAACATGGTGTTCAACTTTCAATGTTCCGAAAGGAGCGTATTGGTGGTGATTCACATGGAATTTCTTATTGGTATGAAGACGACCCAATTATTGGTCATAGGTTGTATCGGGAAATAAGAAAAACTGAAGTGGTTCAAGTCAAGAAAGGGAAAGCAAGAGGTTCCCAAATTCTTTCTAATACATCGTATCAGTGGGAAGCAGTTGCTACTAATTTTGATGAATTTCAAGATGTCTCTGAGAAGCTTTTATCGAGTAAAAACAGAATGGAGGCTTCTTTAGGGAAGAGGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAGAAGTTGCTGAAAAAGCAGCACAGGGAAGCTCTTCTTCTTGATAATTTCTATGGTGTGGATGGGCTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACGTACACTTATGATGATTATGATCGGTCCATCAATGAGGCGATTAAGATAACGAAAAACAAACAACCATCCCCAGAACATATACCCAGGAGGGAAGTTAGAGCAAAACCTGAAACTTTGACTAATGGTAAATCGAGTGGTTCTTCACATGCCCCACAACATTTGAATTTTCGTATGTCATCTCCAAAATCACCTGACTTTCAAGATGAAGAGGATGATGAGGATCAACCTGACACATTGGACCGTAGGAAAAGACAGAGGCCTCAGCGGTATTCAGAGAAAGAGTTTGTTGAAGCATTGTCAGATAATGATGCAGACTTTGACACAGATGATGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAGTATCTCCGGAAACGTAAGCAAAGGAAGGTTTCTAGTGGCTCTGCCTCTGAAGGAGATGAAGAATATAATTGGGATGAAGACAGTGTTGAAGATGAAGATGAAGATGAAGATTCATTGAGTATTAGTGAGGATAGCGACAAGCCCCGTAAATTCAAGCAATTGCGAGGCCGTACTAGGAGGGACACCAAACAGAGGTCTGTTGGTGAAATTCAATCAGGTCTAAGACGCAGTAAGAGGGCCACTAGAAACCGTATAAACTACCATCAGTATGAGATGTCTGAGTCTGAAACCGAGTTTGATAAACCTGAGAAGTCTAATAATGCATCAGATGATCACTCAGATCCCACCGAGGAAGGGGATTATATGATGGGCAGTGAAGATTCATATGACAATGAAGATCATGAAATTAAAGTAGTTGAGCCTGTTATTAACCCTTCGACCGACCCAGAAAACGAATGTCCTGCTGTAGGAGAGAATGAACACAACCAAAGCCAAAACGAAAACCAGCCTCCTGAAAAATCAAGTAGTCCAGGTCAGCAGGAAGTTGATGATGGCATGAAGAAGAGACGATTCCTTGATTTGAATGAGCTTGCTCCTAGTTCTGGATTTGACGACGGTCCAAATATGCCGACAAAAGATGAGGGCAATGATGATTACTGA 2235 0.455 MSQRSSPLPTAEPSHPPSPEPDSHKEQPTTTAAAAVAADDPPATTRSNRPSRACTLRAAARLRSASQQEAAAIKRRPKAAKKEQQRHQEDSPPPSPRQQQCSKIVTPLVEPPPPSLLPRWNLRSMWELASVLNFLHLFRPILNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSHDTWITVLCRKLRDWWYWVANGDMPIVASHGVEIEVYKSLDPGVRVVILKALCDIRAEQEDIRSYIDNSLKHGVQLSMFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKTEVVQVKKGKARGSQILSNTSYQWEAVATNFDEFQDVSEKLLSSKNRMEASLGKRLKIDMLPEIEKVHKRKEKLLKKQHREALLLDNFYGVDGLAPGRSLRDRKPVTYTYDDYDRSINEAIKITKNKQPSPEHIPRREVRAKPETLTNGKSSGSSHAPQHLNFRMSSPKSPDFQDEEDDEDQPDTLDRRKRQRPQRYSEKEFVEALSDNDADFDTDDDDDIVGEAVYDEEYLRKRKQRKVSSGSASEGDEEYNWDEDSVEDEDEDEDSLSISEDSDKPRKFKQLRGRTRRDTKQRSVGEIQSGLRRSKRATRNRINYHQYEMSESETEFDKPEKSNNASDDHSDPTEEGDYMMGSEDSYDNEDHEIKVVEPVINPSTDPENECPAVGENEHNQSQNENQPPEKSSSPGQQEVDDGMKKRRFLDLNELAPSSGFDDGPNMPTKDEGNDDY 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0976 744 MobiDBLite consensus disorder prediction 424 439 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 544 566 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 418 744 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 614 644 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 503 520 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 1 109 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 478 502 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 74 90 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 91 105 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 521 540 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 682 706 - -
Lal17g0976 744 MobiDBLite consensus disorder prediction 440 464 - -
Lal17g0976 744 PANTHER REMODELING AND SPACING FACTOR 1 27 743 IPR028938 GO:0006355|GO:0031213
Lal17g0976 744 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 27 743 - -
Lal17g0976 744 Pfam DDT domain 130 175 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0976 Lal-Chr17 7928551 7936397 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lal17g0976 DDT 2.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0976 - - gmx:100816258 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0976 17 7928551 7936397 Lal17g0976 17 7928551 7936397 ECH
Lal7g0948 7 15822588 15829229 Lal17g0976 17 7928551 7936397 PCT
Lal17g0976 17 7928551 7936397 Lal7g0948 7 15822588 15829229 PCT