Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0968 ATGATGGTTACTGCTGGCGATGTTTTAACAGAAGTGGGTGCAGCACGTGAGCTACACGTGCTTGCCGTAGATGATAGCCATGTTGATCGTAAAGTCATTGAACGTTTACTCAAAATCTCTTCTTGCAAAGTGACAGTGGTAGAGAGTGGAACCAGGGCTCTTCAATATCTAGGATTGGATGGAGAGAACACCTCCATTGATTTTGAAAGTTTGAAGATTAATCTGATAATGACCGACTATTCCATGCCAGAGATGACAGGTTATGAACTACTCAAGAAGATTAAGGAGTCCTCTGTTTTTAGAGAGATTCCAGTGGTGGTTATGTCATCTGAGAATATTTTGACCAGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGATTTTCTGTTGAAGCCGGTGAAGTTGTCCGATGTAAAACGCTTAACAGATTTCATGAGAGGTGAAAGGAAGATAGGAGAAAAAAGATATCAGAAAAGAAGGCAATCAGATGATTGCACTCCATCTCTATCAACTGTGATCTCACTGACTTCTTATCATCGCAATATAACATCACCAGAACTACTTCCATCGTTGTCGCCATCTGCGTCGCCTTCCAAGAAATCTCGAGCGAGCAAAAAGATTGAGCTGTGCTAA 633 0.4171 MMVTAGDVLTEVGAARELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGENTSIDFESLKINLIMTDYSMPEMTGYELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRLTDFMRGERKIGEKRYQKRRQSDDCTPSLSTVISLTSYHRNITSPELLPSLSPSASPSKKSRASKKIELC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0968 210 MobiDBLite consensus disorder prediction 185 200 - -
Lal17g0968 210 Pfam Response regulator receiver domain 20 139 IPR001789 GO:0000160
Lal17g0968 210 CDD REC_typeA_ARR 20 141 - -
Lal17g0968 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 16 199 - -
Lal17g0968 210 SMART REC_2 18 142 IPR001789 GO:0000160
Lal17g0968 210 Gene3D - 18 183 - -
Lal17g0968 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 199 IPR045279 GO:0009736
Lal17g0968 210 SUPERFAMILY CheY-like 17 149 IPR011006 -
Lal17g0968 210 MobiDBLite consensus disorder prediction 185 210 - -
Lal17g0968 210 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0968 Lal-Chr17 7847693 7851008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0968 10 159 Response Regulator Gene Family AT5G62920 75.497 4.10e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal17g0968 Response_reg 2.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0968 K14492 - gmx:100819165 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1542 14 16142565 16149456 Lal17g0968 17 7847693 7851008 ECH
Lal17g0968 17 7847693 7851008 Lal17g0968 17 7847693 7851008 ECH