Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0932 ATGGTGACAAGATCCGGTAGTGATTTGTTGGACTTGGTGACAGCAGACATTTTTAATATCCCTCAAACTCTCAGACCTCTTCCGCGAGTTATGACTGATCCAGGAATTAAATCTGATGTAAATGGCGGCAAACAAAGTAACGAAAATGATTCAGAATACCACCACAAGATGATCATTGTGGCAAACTTTCTTCCCATCAATGCGAGAAAGGATAACTTATCTGGCAAATGGTGTTTCACCTATGACGAAGATTCAATATTTTGGCAGTTAAAGCATGGTATTTCTTCTGATACTCGAGTTGTGTATGTGGGATCTTTGAAGGTAGATATCGATGTTAGTGAAGAAGAGGAAGTTGCTGCTCAGTTGCTGGAGGACTTCAATTGTGTACCTACCTTTATTCCTCCAGACCTCATGGAAAAGTTTTACGATGGATTTTGCAAACAACAGTTGTGGCCACTATTCCATTACATGATGCCTATGTATCCACGCAACTGCAATATCTTTGATAGGTCTCTTTGGCTGGCTTATGTTTCTGCAAACAAGATATTTGCAGATAAAGTCCTTGAGGTTGTTAATCAAGAAGAAGACTATGTTTGGATCCATGATTACCAGCTTATGGTTCTTCCAACATTTCTGCGGAAGAGATTCATTCGAGTCAAGTTAGGTTTTTTCCTTCATATTCCATTCCCTTCATCAGAAATTTATCGAACTCTGCCGGTCAGAATTGAAATTTTGAAAGCACTGCTTAATGTGGATTTAATCGGTTTCCACACATTTGACTATGCTCGCCATTTCTTGTCCTGCTGCAGTCGAATTCTTGGTTTGCAATATGAGTCCAGAAGGGGTTACCTTGGGCTTGAATACTTTGGGCGTACAATATTCATTAAAATATTGCCTGCAGGAATTCATATGGGTCGTATTCAATCTGCCTTGAACCACCCTTCTTTTTCTATCAAAGCCAGAGAAATCTGCCAACAATTGAAGGGAAAAAGAGTTATCGTTGGGGTTGATGATATGGACATATTCAAAGGTATCAGTTTAAAGTTCTTGGCTGTTGAACAACTCCTGCAGCAATATCCAGAACTACAAGGTGAATTAGTATTGATCCAAATTTTAAATCCTCCAATCGGTATTGGCAATGATATTGAAGAAGAAATGAAGGAGGCTCACATTACTGCTAGAAGGATAAATGGAAGGTTTGGTATCCCAGGTTCTTATGAACCTATCATCATCATTGAGCGCTATGTTCCTTTCAACGAGAAGACAGCTTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCGGTCCGTGATGGTATGAATTTGGTTCCTTACAAGTACATTGTTTGTAGGCAGGGGAGTCCTAAATTGGATGAAGTCTTAAAAATTGATTCTGATTCCCCTCGTACAAGTTCCCTTGTTATTTCAGAGTTTATAGGTTGCTCGCCATCTCTTAGCGGAGCAATCAGGATAAACCCATGGGATATTAATGCCATAGCTGATGCATTAAATTTAGCCATAACAATGGATGACGGAGAGAAACAATTGCGGCATGAGAAGCACTATCGGTATGTTAGTTCTCATGATGTGGGTTACTGGGCCCGAAGTTTTGAGCAAGATCTAGCGTTCTCTTGCAAGGATCACTATGATAAACGTTGCTGGGGTCTTGGCTTTGGCCTGAACTTTAGAGTCTTAGCACTTTCCCCTAGCTTCAGGAAGTTGTCCATAGACCACATTGTTTCTGCATATAAAAGGACAAGTCGCAGGGCAATCTTTTTGGATTATGATGGTACACTTGTACCCCAAAATTCCATTGTTAAAGCCCCCAGTCCCGCTCTAATATCTATGCTAAACAAGCTCTGCAGTGATCCTAATAACACCGTGTTTATTGTAAGTGGCAGAGGGAAAATCTCATTGAGTGAATGGTTTGATCAGTGTAAGAAACTTGGTATAGCAGCTGAGCATGGCTATTTTATAAGGTGGGGTAAGCAATCGAGCTGGAAAATGAGCCATGTATGTACAGATTTTGCATGGAAAAGGATTGCTGAACCTGTTTTCAGATCATATACTGAGGCCACCGATGGCTCCTATATAGAAGCCAAAGAGAGTGCCTTGGTATGGCATCATCACCGCGCTGATCCCGAGTTTGGATCTTGGCAGTCCATAGAGCTGTTGGAGCACCTCGAAAGCGTGCTTGCAAATGAGCCAGTTGTTGTTAAGAAAGGAAAGGAGATTGTTGAAGTCAAGCCTCAGTGGGTTACTAAAGGGTCAGTCACACAGGAAGTTCTGTCTGCTCTAACCAGGGCTGGGAAATCTCCGGATTTTGTGTTGTGCATTGGGGACGATCGATCCGACGAGGATATGTTTGAGAGCATACTAACCAAAGCATATGGTGCAACCTCCTCTACCTCCCCGGAAATGTTTGCTTGTACTGTTGGGCAAAAACCTAGCAAGGCAAGGTACTACGTAGACGATACAGTGGAGGCGATCATGATACTTCAAGGTCTTGCTGCTATTTCAGCCATTATGATAAGATCTGCTGCAGCTGCTGTTTAA 2556 0.4174 MVTRSGSDLLDLVTADIFNIPQTLRPLPRVMTDPGIKSDVNGGKQSNENDSEYHHKMIIVANFLPINARKDNLSGKWCFTYDEDSIFWQLKHGISSDTRVVYVGSLKVDIDVSEEEEVAAQLLEDFNCVPTFIPPDLMEKFYDGFCKQQLWPLFHYMMPMYPRNCNIFDRSLWLAYVSANKIFADKVLEVVNQEEDYVWIHDYQLMVLPTFLRKRFIRVKLGFFLHIPFPSSEIYRTLPVRIEILKALLNVDLIGFHTFDYARHFLSCCSRILGLQYESRRGYLGLEYFGRTIFIKILPAGIHMGRIQSALNHPSFSIKAREICQQLKGKRVIVGVDDMDIFKGISLKFLAVEQLLQQYPELQGELVLIQILNPPIGIGNDIEEEMKEAHITARRINGRFGIPGSYEPIIIIERYVPFNEKTAYYALAECCIVNAVRDGMNLVPYKYIVCRQGSPKLDEVLKIDSDSPRTSSLVISEFIGCSPSLSGAIRINPWDINAIADALNLAITMDDGEKQLRHEKHYRYVSSHDVGYWARSFEQDLAFSCKDHYDKRCWGLGFGLNFRVLALSPSFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQNSIVKAPSPALISMLNKLCSDPNNTVFIVSGRGKISLSEWFDQCKKLGIAAEHGYFIRWGKQSSWKMSHVCTDFAWKRIAEPVFRSYTEATDGSYIEAKESALVWHHHRADPEFGSWQSIELLEHLESVLANEPVVVKKGKEIVEVKPQWVTKGSVTQEVLSALTRAGKSPDFVLCIGDDRSDEDMFESILTKAYGATSSTSPEMFACTVGQKPSKARYYVDDTVEAIMILQGLAAISAIMIRSAAAAV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0932 851 SUPERFAMILY HAD-like 589 837 IPR036412 -
Lal17g0932 851 Pfam Glycosyltransferase family 20 56 541 IPR001830 GO:0003824|GO:0005992
Lal17g0932 851 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 841 - -
Lal17g0932 851 Gene3D - 591 823 IPR023214 -
Lal17g0932 851 TIGRFAM T6PP: trehalose-phosphatase 587 834 IPR003337 GO:0003824|GO:0005992
Lal17g0932 851 Gene3D Glycogen Phosphorylase B; 47 308 - -
Lal17g0932 851 Gene3D - 671 751 - -
Lal17g0932 851 Gene3D Glycogen Phosphorylase B; 309 526 - -
Lal17g0932 851 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 841 IPR001830 GO:0003824|GO:0005992
Lal17g0932 851 CDD HAD_TPP 590 826 - -
Lal17g0932 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 56 541 - -
Lal17g0932 851 CDD GT20_TPS 56 542 IPR001830 GO:0003824|GO:0005992
Lal17g0932 851 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 791 IPR006379 -
Lal17g0932 851 Pfam Trehalose-phosphatase 592 825 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0932 Lal-Chr17 7405891 7412103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0932 1 841 Trehalose Biosynthesis Gene Families AT1G23870 64.142 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0932 K16055 - gmx:100812031 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0932 17 7405891 7412103 Lal17g0932 17 7405891 7412103 ECH