Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0922 ATGAAGAATTTACATTGGTTCAAAAAAAAATCTATTAAGGGCAAGCAAGGAGGGAGAAGAATTTCATTTGGGGAATACAAGAGAGCAGTGTCATGGTCAAAGTATTTGGTGTCACCAGGTGCTGCTATAAAGGGAGAAGGAGAAGAAGAATGGAGTGCAGATATGTCTCAGTTGTTCATTGGATCCAAATTTGCTTCTGGGAGACACAGTAGAATCTACAGAGGTGTTTATAAGCAGAAAGATGTGGCAATCAAGCTTATAAGTCAACCAGAGGAAGATGAAAATTTAGCTGCTTTTCTTGAGAAGCAATTTACTTCTGAGGTTTCTTTGCTGCTTCATTTGCACCATCCAAATATCATTACTCTCGTTGGTGCTTGCAAAAAAGCTCCCGTCTTTTGTATAATCACTGAATATTTGGCTGGCGGCTCATTGAGGAAATACCTGCATCAACGACAACCATATTCAATTCCAGTTCGACTCGTTCTGAAATTAGCCTTAGACATTGCGCTAGGGATGCAATATCTTCATTCTCAGGGGATACTTCACAGGGATCTTAAATCAGAAAATCTTCTATTGGGGCAAGATATGTGTGTAAAAGTAGCAGATTTTGGGATCTCATGCTTAGAATCTCAGTGTGGTAATGCAAAAGGTTTTATCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCATACCAAGAAAGTAGATGTCTATAGTTTCGGGATTGTTCTGTGGGAGCTTTTAACAGGATTAACACCGTTTCACAATATGACGCCAGAGCAAGCGGCCTATGCAGTTTCCCACAAGAATGAAAGGCCTCCATTGCCATCAGAATGTCCATGGAGATTTAGTGATCTAATCAATAGATGTTGGTCAAGCAATCCAAATAAAAGGCCACATTTTGATGAGATAGTTTCCATTTTGGAGAACTTCACTGAATTATTGGAGCATGATCCAGAATTTTTATCAACTTATAAACCCCCTCCTACTAATACATTTTTTGGATGCTTACCAAGATTCAATGCTACTCATAAATCACCTATTTCCAAAGATTAG 1068 0.3904 MKNLHWFKKKSIKGKQGGRRISFGEYKRAVSWSKYLVSPGAAIKGEGEEEWSADMSQLFIGSKFASGRHSRIYRGVYKQKDVAIKLISQPEEDENLAAFLEKQFTSEVSLLLHLHHPNIITLVGACKKAPVFCIITEYLAGGSLRKYLHQRQPYSIPVRLVLKLALDIALGMQYLHSQGILHRDLKSENLLLGQDMCVKVADFGISCLESQCGNAKGFIGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTGLTPFHNMTPEQAAYAVSHKNERPPLPSECPWRFSDLINRCWSSNPNKRPHFDEIVSILENFTELLEHDPEFLSTYKPPPTNTFFGCLPRFNATHKSPISKD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0922 355 Pfam Protein tyrosine and serine/threonine kinase 61 312 IPR001245 GO:0004672|GO:0006468
Lal17g0922 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lal17g0922 355 PANTHER SERINE-THREONINE PROTEIN KINASE 1 334 - -
Lal17g0922 355 SUPERFAMILY Protein kinase-like (PK-like) 48 312 IPR011009 -
Lal17g0922 355 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0922 355 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Lal17g0922 355 SMART serkin_6 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0922 355 Gene3D Transferase(Phosphotransferase) domain 1 141 329 - -
Lal17g0922 355 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 334 - -
Lal17g0922 355 CDD STKc_MAP3K-like 65 312 - -
Lal17g0922 355 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Lal17g0922 355 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Lal17g0922 355 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Lal17g0922 355 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Lal17g0922 355 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0922 Lal-Chr17 7310117 7315295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0922 31 321 MAP Kinase Kinase Kinase AT1G62400 62.373 1.67e-134 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal17g0922 PK_Tyr_Ser-Thr 4.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0922 - - gmx:100807757 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0922 17 7310117 7315295 Lal17g0922 17 7310117 7315295 ECH
Lal14g1522 14 16030430 16034931 Lal17g0922 17 7310117 7315295 PCT