Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0911 ATGCAATTCACTCTCTCTCACCACTCTTCTTCCTTCTCTCTCCTCCATAACCAAAACCTTCAACAAAAACACTCTCTTTTCTTCAACCCAATTCGTTTCTCTTCCAAACCCAACATCGAAACCACTTCAAATGCTTCTTCTTCTTCTTCTTCTTCTTTTACTCGTCGATCATGGCCTCTTCCCATTTCTTCTTCCTCTTTCAAATTCAGACCACGCCCTTCTCTTTTCTCTTCCCCTTCCTCCGATCATTTTCAACCCACCGCCGTCTCTGTATCCGACGACGGCGCCACCGCTGACTCCGGAAGCTTAATCAAGACCCTGCAGCTTGGATCCCTTTTTGGGCTTTGGTACCTTTTTAATATTTACTTCAATATCTATAACAAACAGGTTTTGAAGGCTGCACATTTTCCTGTAACGGTTACTGCAGTTCAATTTGCTGTTGGAACAGTGCTTGTAGCGTTTATGTGGGGTTTTAATCTTTATAAGAGACCAAAGCTCAGTGGTGCTCAGCTTGCAGCCATATTACCGCTAGCTATGGTGCATACGTTAGGGAACCTTTTCACTAACATGAGTCTTGGAAAGGTAGCTGTGTCGTTCACTCATACAATCAAAGCCATGGAGCCTTTCTTTTCGGTGATCCTTTCTGCAATGTTCATGGGAGAGATGCCTACACCATGGGTGGTTGGCTCCCTTGTTCCTATTGTTGGTGGAGTTGCATTGGCATCTCTTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTTACAAACCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAAGAAAGAGGATTCTATGGACAACATAACACTCTTCTCTATAATAACAGTGATGTCCTTCTTCTTGTTAGCACCTGTGGCTGTCTTCTTGGAGGGTGTAAAATTTACCCCTGCTTACCTGCAATCTGCTGGTTTAAATGTTAGACAAGTGTACATCAGATCTCTTCTTGCTGCACTTTGTTTCCATGCCTATCAGCAGGTTTCTTATATGATATTGCAGAGGGTATCACCGGTTACCCACTCGGTTGGCAATTGCGTGAAACGGGTGGTGGTCATTGTAAGCTCTGTCATCTTCTTCAAAACAGCTGTCTCTCCTGTGAATGCTTTTGGGACTGCTATAGCTCTTGCAGGTGTTTTCCTCTATTCAAGGGTGAAGAGAATTAAGTCAAAGCCAAAAACAGCTTAA 1230 0.4366 MQFTLSHHSSSFSLLHNQNLQQKHSLFFNPIRFSSKPNIETTSNASSSSSSSFTRRSWPLPISSSSFKFRPRPSLFSSPSSDHFQPTAVSVSDDGATADSGSLIKTLQLGSLFGLWYLFNIYFNIYNKQVLKAAHFPVTVTAVQFAVGTVLVAFMWGFNLYKRPKLSGAQLAAILPLAMVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFMGEMPTPWVVGSLVPIVGGVALASLTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVKKEDSMDNITLFSIITVMSFFLLAPVAVFLEGVKFTPAYLQSAGLNVRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFKTAVSPVNAFGTAIALAGVFLYSRVKRIKSKPKTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0911 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 244 - -
Lal17g0911 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 400 - -
Lal17g0911 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal17g0911 409 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
Lal17g0911 409 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 75 382 - -
Lal17g0911 409 PANTHER SOLUTE CARRIER FAMILY 35 75 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0911 Lal-Chr17 7054774 7058310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0911 27 409 Antiporters AT5G33320 70.812 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0911 K15283 - gmx:100804563 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0911 17 7054774 7058310 Lal17g0911 17 7054774 7058310 ECH
Lal17g0911 17 7054774 7058310 Lal21g0734 21 6010706 6020552 LSH
Lal7g0916 7 15626731 15630641 Lal17g0911 17 7054774 7058310 PCT
Lal19g1075 19 14481190 14485193 Lal17g0911 17 7054774 7058310 PCT
Lal17g0911 17 7054774 7058310 Lal7g0916 7 15626731 15630641 PCT
Lal17g0911 17 7054774 7058310 Lal19g1075 19 14481190 14485193 PCT