Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0896 ATGGCATCATCATCTTGCTCATACAATTCTCCTTGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGAATGCATCTTTGCACCTTACTTCCCACCCGAAGAACCCCAAAAATTTGCCAACGTTCACAAGATCTTTGGTGCTAGCAATGTGACTAAGCTCCTTAACGAACTCCTCCCTCAGCAGAGGGAAGATGCTGTGAATTCCCTTGCTTATGAAGCAGAGGCACGTGTGAGAGATCCTGTGTATGGTTGTGTAGGAGCTATAACGTTCCTTCAGAGACAAGTTCAAAGGCTTCAAAAGGAGCTTGATGCTGCTAACGCCGAGCTTCTACACTATGCTTGCAATGAAATTTCTCCACTTCCAACATCTCTTGCAATTTCACCACTAACTCCACTTCAACAAATTCCACAAAGGACACAGTTTGGTGCAAGAATTGGTAATGAAGGAAGTGGATTTTATAGGCAATCTCCTATCACTTACTCTTTTCCTTATTCCCTTCCATGGAATAATGATACCTCTTTGGAGGATATCAATGAAGGAGGAGTTATGGTCTCTGCCCATTTGGCCTTAGACTCTTCTGGTTCTAGAAGTGAAGTCAGTGACTATGAGGGAGTTGAGTTAATATTTAGCAAAATGTCACAATCATATACACAGAAACAACATTTTCAGCTTCAGTTCGAAGTGTATATAGGCACTCTCAAGTCTCAATCTCATAAGTACCTAGTTAACCATTTGAAAGTGTTACTATCAATCACCAACACTCACCTCTAG 777 0.4183 MASSSCSYNSPCAACKFLRRKCMPECIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANAELLHYACNEISPLPTSLAISPLTPLQQIPQRTQFGARIGNEGSGFYRQSPITYSFPYSLPWNNDTSLEDINEGGVMVSAHLALDSSGSRSEVSDYEGVELIFSKMSQSYTQKQHFQLQFEVYIGTLKSQSHKYLVNHLKVLLSITNTHL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0896 258 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 179 - -
Lal17g0896 258 PANTHER ELONGATED PETIOLULE 1 3 179 - -
Lal17g0896 258 Coils Coil 90 117 - -
Lal17g0896 258 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lal17g0896 258 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0896 Lal-Chr17 6930968 6934802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0896 1 180 AS2 family AT5G63090 64.767 2.17e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal17g0896 LOB 6.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0896 - - ahf:112722314 280.796