Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0895 ATGGCCTCAGCTTCTCAAAAATTTGCACCACCTTCTTGCACTTGCTCTTCAGCCGTCAACAACTCTACCACCATTGCGGCTGCCGCCACTCCCTCTGCTGACTGGCCTGCCACCGTCCCCGATGATGGCCGCCTAAACAAGATGGCCATCGTTAATGCTGTCGACTCCCTACCACAACCTTCCATCAATACCAAAGGAATCATTACATTGCCAAGGCCTCAAACAAGCCACCCTTTGGATCCTCTATCTCCTGCTGAAATCTCTGTGGCAGTAGCAACTGTGAGGGCTGCTGGACAAACTCCTGAGCTCAGAGACTGTATGCGATTCATAGAAATAGTCTTGCTCGAACCGGATAAACATGTTGTTGCTCTGGCAGATGCTTATTTCTTTCCACCTTTCCAACCATCATTGCTTCCTAAAGGAGGGTTTGTGATTCCAACTAAACTCCCTCCAAGATGTGCTAGACTTCTTGTTTACAATAGGAAGACAAATGAGACTAGCATATGGATCATCGAGTTATCGCAACTACATGCTGTAACTCGAGGTCGTAATCATCTAGGAAAAGTAATTTCATCACAAGTTTTACCTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGCGAGGCTGCTGTTAAAAGTTATCCTCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAAACATGGAGCTTGTGATGGTAGATCCCTGGTGTGCTGGTTACTTCAGTGAAGCTGATAATCCGAACCGAAGACTTGCTAAACCAATAATATTTTGCAAGTGTGAGAGTGATTGCCCTATGGAAAACGGCTATGCTCGCCCGGTCGAGGGAATCTTTGTTCTTGTTGATATGCAAAACATGGAGGTGATACAGTTCGAAGACCGCAAACTTGTTCCTCTGCCTCCTGTTGATCCCTTAAGGAACTATACACATGGTGCAACTAGAGGTGGCAGTGATAGAAGTGACTTAAAACCATTGAAAATTGTTCAACCTGAAGGTCCAAGCTTTTCTGTCAATGGATATTATGTTGAATGGCAAAAGTGGAACTTTCGGATTGGATTTACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATCTTGATGGTAGTCAAGGGCTAAGACCTGTAGCTCATAGGTTGAGTTTTGTGGAGATGGTTGTACCCTACGGAGATCCGAACGATCCACATTACAGGAAAAATGCTTTCGATGCTGGGGAAGATGGCCTAGGAAGAAATGCACATTCCTTGAAGAAGGGCTGTGATTGTTCTGGCTTAGTCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGTGTGGAAACAATTGAAAATTGTGTATGTTTGCATGAAGAAGATCATGGAATTCTCTGGAAGCATCAAGATTGGAGAACTGGCTTATCAGAAGTCCGAAGATCTAGAAGACTTTCAGTTTCATTTATATGTACTGTGGCTAACTATGAGCATGTGTTGTTCCAGGATGGAAAGATGGAAGCTGAAGTTAAGCTCACTGGAATTCTGAGCATGGGAGCGTTGATGCCCGGAGAGTATCGAAAATATGGAACCGTGATTGCACCAGGTCTATATGCTCCAGTTCATCAACACTTTTTTGTTGCTCGTATGAACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAAGTCAATGTGAAAGCTGAGGAACCTGGTGATCATAATGTTCACAATAATGCGTTCTATGCCGAAGAAACTTTGCTCAGATCGGAAATGGAAGCCATGCGTGATTGCGATCCCATGACTGCTCGATCTTGGATTGTAAGGAACACAAGATCAACCAATAGAACTGGACACTTGACAGGCTACAAGCTAGTACCTGGCTCAAATTGCTTACCATTCGCGCATCCGGATGCCAAGTTTTTAAGAAGAGGTGCTTTCTTGAAGCATAATCTTTGGGTTACCGCATTCTCACCCGATGAGTTGTTTCCGGGAGGAGAATTTCCTAATCAAAATCCACGCATTGGCGACGGATTACCTACATGGGTTACGCAGAACCGATCTTTAGAAGAGTCTGATATAGTTCTTTGGTATGTATTTGGAGTCACACATGTTCCTCGTTTAGAAGACTGGCCTGTTATGCCAGTAGAACACATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCCCCTGCAATAGATGTTGCACCTAGTAAATGTGAATTGGGGTCTAAAGAAAATGATATAAAGGATAATGGTGTTTTGAAGCCAATTGAGAATGCTTTAGCATCAAAGCTCTAG 2304 0.4336 MASASQKFAPPSCTCSSAVNNSTTIAAAATPSADWPATVPDDGRLNKMAIVNAVDSLPQPSINTKGIITLPRPQTSHPLDPLSPAEISVAVATVRAAGQTPELRDCMRFIEIVLLEPDKHVVALADAYFFPPFQPSLLPKGGFVIPTKLPPRCARLLVYNRKTNETSIWIIELSQLHAVTRGRNHLGKVISSQVLPDVQPPMDAVEYAECEAAVKSYPPFIEAMKKRGIENMELVMVDPWCAGYFSEADNPNRRLAKPIIFCKCESDCPMENGYARPVEGIFVLVDMQNMEVIQFEDRKLVPLPPVDPLRNYTHGATRGGSDRSDLKPLKIVQPEGPSFSVNGYYVEWQKWNFRIGFTPKEGLVIYSVAYLDGSQGLRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGRNAHSLKKGCDCSGLVKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLSEVRRSRRLSVSFICTVANYEHVLFQDGKMEAEVKLTGILSMGALMPGEYRKYGTVIAPGLYAPVHQHFFVARMNMAVDSKPGEALNQVVEVNVKAEEPGDHNVHNNAFYAEETLLRSEMEAMRDCDPMTARSWIVRNTRSTNRTGHLTGYKLVPGSNCLPFAHPDAKFLRRGAFLKHNLWVTAFSPDELFPGGEFPNQNPRIGDGLPTWVTQNRSLEESDIVLWYVFGVTHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAIDVAPSKCELGSKENDIKDNGVLKPIENALASKL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0895 767 PANTHER COPPER AMINE OXIDASE 46 755 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 SUPERFAMILY Amine oxidase catalytic domain 323 738 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 SUPERFAMILY Amine oxidase N-terminal region 199 316 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 Gene3D - 63 202 - -
Lal17g0895 767 Pfam Copper amine oxidase, N3 domain 200 303 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 Gene3D Copper amine oxidase, catalytic domain 316 738 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 PANTHER AMINE OXIDASE 46 755 - -
Lal17g0895 767 Pfam Copper amine oxidase, enzyme domain 330 734 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 SUPERFAMILY Amine oxidase N-terminal region 75 201 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal17g0895 767 Gene3D - 205 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0895 Lal-Chr17 6912331 6918941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0895 K00276 - gmx:100798722 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0895 17 6912331 6918941 Lal17g0895 17 6912331 6918941 ECH
Lal7g0910 7 15577935 15580989 Lal17g0895 17 6912331 6918941 PCT
Lal19g1056 19 14331692 14337324 Lal17g0895 17 6912331 6918941 PCT
Lal17g0895 17 6912331 6918941 Lal7g0910 7 15577935 15580989 PCT
Lal17g0895 17 6912331 6918941 Lal19g1056 19 14331692 14337324 PCT