Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0880 ATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCCGTAGATGAAATTGATGTTAGTGAAGATGGAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAAAAATATAGGTTTGCAAACAATGATATTGCATATAATTTTTATAAGATGTATGCTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGGAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGATGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAAACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAATGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCCGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTACGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2082 0.3636 MEEEMNLNHEIPEAVDEIDVSEDGNINEVEEFDFEEIDFGSLNEDEVKKYRFANNDIAYNFYKMYAMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKGTRCGCLARMKIHIDKEKDDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETNIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEECKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNERWTKKAKNVEGVNFQQCELSRESVKSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0880 693 Pfam FAR1 DNA-binding domain 60 148 IPR004330 -
Lal17g0880 693 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 522 IPR031052 GO:0006355
Lal17g0880 693 Pfam MULE transposase domain 268 362 IPR018289 -
Lal17g0880 693 PANTHER OS02G0262500 PROTEIN 48 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0880 Lal-Chr17 6748387 6750670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal17g0880 MULE 1.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0880 - - lang:109327968 589.726