Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0877 ATGGCTTCTAAAACCCATAATCTCTTTCTCTTTTCCCTCATTTCATTACTCTTCTTCTCCCTCTCTTCATTCACCATCCATGCCAAGCTTCACCTACACCATTCAGACCTCAATTCTCTTAACACTCTCTTCATTGACCTTAAAGTCAACGGTCAACTTCATAATATAACTACCTTCCCATGTAACATAGAAGGTGTTTTCTGTGAGAGAAGGATCTCTAACAATGAAAGCTATATCCTTAGAATAACAAGGCTTGTTTTAAAGTCCAAAAAACTCAATGGTTTTCTTTCTTCTTCTATAGGAAACCTCACAGAACTTAAAGAACTCTCTCTTTCAAATAATCAAATAGTTGACTTTATCCCACCCCAGATTGTTAATTGTAGAAAACTTGAGATTCTTGACCTTAGAAATAATCACTTTTCTGGTGAAGTTCCCTTCGAATTATCCGATCTCGTTCGCCTTCGAGTCCTCGATGTCTCTTCGAATTTCCTATCAGGAAACTTAAACTTTCTTAAGTATTTTCCAAATCTTGAAACTCTCAACCTTGCTGATAATCTCTTCATAGGAAGAGTTCCACCTTGCATACGTTCCTTTAGAAATCTTAGACACTTTAACTTCTCTGGGAATGGTTTTCTTGAAGGTTCTGTTCCCTCAGATAGTGTTCCTAAACGTTATAAATTCATTGAGAGTTCAAATGGAAGAAGAAATAGTTCTGCACCTGCTCCACAATTCAGCAAGAGAAAGAGTAATTTGAACATTGCTCCTTCCCCGGTTCCATCGGGGGCGAAAAAACATCACCATAAATCAACCAAGAGTAATGTAACTGGGTGGATTGTTGGTATTCTTGCAGGATCATTTGCAGGGATTATAGCAGGGCTCATATTTTCTGTTTTGTTCAAGTTAGCTTTAACTTTGTTCAAAAGAGGTGGAAAAAGTTCAGGTGGTGCTGCAATTTTTAGTCCTCTGATAATCAAGAAAAAAGAGGACTTGGCTTTCTTGGAGAAAGAGGATGGATTGGCTTCATTTGAACTCATTGGAAGAGGTGGTTGTGGAGAAGTTTATAAGGCTGAATTACCAGGAAGTGATGGCAAAATCATTGCCATAAAGAAGATTGTTCAGCCTTCAAAGGAAGCAGCAGAGTTGTCTGAAGAAGATAGTAAGCTTTTGCATACAAAAATGCGCCAAATTCGATCGGAGATTAACACGGTTGGCCAAATTCGCCACCGCAATCTTCTGCCTCTGCTAGCTCATGTGTCTAGGCCTGATTGTCACTATCTTGTTTATGAATACATGAAGAATGGAAGTTTACAAGATGCGCTTAATAAAGTTGAAGCCGGCGAAAGCAAGTTGGATTGGTTGACAAGGCACAAGATTGCTGTTGGTATTGCAGCTGGCCTTGAATACCTTCACTTGAACCATAGTCCGCGTATAATTCATAGAGATCTCAAGCCAGCAAACGTTCTTCTCGATGATGATATGGAAGCTCGAATTGCAGATTTCGGACTCGCGAAATCGATGCCAGATGCTCAAACACATATAACAACTTCAAATGTGGCTGGAACTGTGGGTTATATAGCACCTGAGTATCACCAGATACTAAAGTTCACTGACAAGTGTGACATATACAGCTTCGGAGTTCTACTTGGTGTCTTGGTGATGGGAAAGCTTCCATCTGATGAATTCTTTCAGCATACAGATGAAATGAGTTTGGTCAAGTGGATGAGAAATGTGATGACTTCGGAAAATCCGAAGCGAGCAATCGATACAAAGCTGATCAGAAATGGATATGAGGAGCAAATGCTACTTGTTTTGAAGATTGCTTGTTTTTGCACCATGGATGACCCTAAGGAGAGACCTAATAGTAAGGATGTTAGGTGTATGTTGTCTCAAATTAAGCACTAA 1902 0.3948 MASKTHNLFLFSLISLLFFSLSSFTIHAKLHLHHSDLNSLNTLFIDLKVNGQLHNITTFPCNIEGVFCERRISNNESYILRITRLVLKSKKLNGFLSSSIGNLTELKELSLSNNQIVDFIPPQIVNCRKLEILDLRNNHFSGEVPFELSDLVRLRVLDVSSNFLSGNLNFLKYFPNLETLNLADNLFIGRVPPCIRSFRNLRHFNFSGNGFLEGSVPSDSVPKRYKFIESSNGRRNSSAPAPQFSKRKSNLNIAPSPVPSGAKKHHHKSTKSNVTGWIVGILAGSFAGIIAGLIFSVLFKLALTLFKRGGKSSGGAAIFSPLIIKKKEDLAFLEKEDGLASFELIGRGGCGEVYKAELPGSDGKIIAIKKIVQPSKEAAELSEEDSKLLHTKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDALNKVEAGESKLDWLTRHKIAVGIAAGLEYLHLNHSPRIIHRDLKPANVLLDDDMEARIADFGLAKSMPDAQTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVLLGVLVMGKLPSDEFFQHTDEMSLVKWMRNVMTSENPKRAIDTKLIRNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0877 633 SUPERFAMILY L domain-like 35 212 - -
Lal17g0877 633 MobiDBLite consensus disorder prediction 231 250 - -
Lal17g0877 633 Pfam Leucine Rich Repeat 176 197 IPR001611 GO:0005515
Lal17g0877 633 SMART serkin_6 339 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0877 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Lal17g0877 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 23 633 - -
Lal17g0877 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 633 - -
Lal17g0877 633 Gene3D Ribonuclease Inhibitor 170 238 IPR032675 -
Lal17g0877 633 Gene3D Ribonuclease Inhibitor 46 169 IPR032675 -
Lal17g0877 633 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Lal17g0877 633 Pfam Leucine rich repeat 82 140 IPR001611 GO:0005515
Lal17g0877 633 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
Lal17g0877 633 ProSiteProfiles Protein kinase domain profile. 339 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0877 633 Pfam Protein kinase domain 342 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0877 633 SUPERFAMILY Protein kinase-like (PK-like) 336 628 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0877 Lal-Chr17 6728598 6730499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0877 1 633 Receptor kinase-like Gene Family AT2G31880 62.267 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lal17g0877 Pkinase 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0877 - - aip:107629358 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0877 17 6728598 6730499 Lal17g0877 17 6728598 6730499 ECH
Lal17g0877 17 6728598 6730499 Lal21g0757 21 6265827 6267716 LSH