Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0866 ATGGAAAAAGAACTGAACGTGAATAATGAAACACTAGAGGGATTAGATGACTGTAATGGTAGTGAAGAAGAAAATGTGAATGAAATAGAGGGGTTAGATTTTGAAGAGATTGATTTTCGATTACTAAATGAAGATGAAGTGAAAAAATATCGAGAAGGATTTAGAGATAAAAAAAATGATTTGATTCGGAAGAGGGCGCCGAGGAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAGTCCACATTGACAAGGAAAAAAGAGATTGGTATGTTAGTTATTTTGTTGATGAACATACTCATGAACTCGTTGGTGAATATTATGGTGCGATGATAGCTTCTAACCGAAGAATGACAAAGACAAATGTGGCTCAGTTGAACACAATGAGAGAAGTGAGTATTGGGACAGGAAAGATATTTTGTTCTTTTGCTGGTCAATGTGGGAAGCAAAGAAAAATTGGAAATGGAGATGCGGAAACTGCATTACAATACCTAAAGGAGCAATCAAAATCAGATTGTGCAATGTATTGGAGGCATAGTGTAGATGAAGAAGATGGATGTAGCATTTTCGACTACTCAATTTTTGGAGATGTTCTTGCTTTTGATGCAACTTATGGTCGAAACAAATATAAGTTTCCAGTTGTTATATTTTATGGTGTTAATCATCACAAACAAACAACTGTGTTTGCTGCTGCTGCTGCTGTGTCAAATGAGATAGAGGAAACATACGTATGGCTTTTGGAGGCAATGAATGAGAAACATCCAAAGTGTTAA 774 0.3579 MEKELNVNNETLEGLDDCNGSEEENVNEIEGLDFEEIDFRLLNEDEVKKYREGFRDKKNDLIRKRAPRKETRCGCLARMKVHIDKEKRDWYVSYFVDEHTHELVGEYYGAMIASNRRMTKTNVAQLNTMREVSIGTGKIFCSFAGQCGKQRKIGNGDAETALQYLKEQSKSDCAMYWRHSVDEEDGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFYGVNHHKQTTVFAAAAAVSNEIEETYVWLLEAMNEKHPKC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0866 257 MobiDBLite consensus disorder prediction 1 22 - -
Lal17g0866 257 PANTHER OS02G0262500 PROTEIN 149 256 - -
Lal17g0866 257 PANTHER OS02G0262500 PROTEIN 52 138 - -
Lal17g0866 257 Pfam FAR1 DNA-binding domain 50 104 IPR004330 -
Lal17g0866 257 Pfam MULE transposase domain 198 251 IPR018289 -
Lal17g0866 257 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 138 IPR031052 GO:0006355
Lal17g0866 257 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 149 256 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0866 Lal-Chr17 6601045 6602106 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal17g0866 MULE 2.5e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0866 - - lang:109327968 331.257