Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0860 ATGGGAAACCAACCCGAAACACACCCTAACCCGACCATCGACCCAAAGAGCGGTTTCAACTCTGAAACCAGAACCTTCCAAAGTCTCCGTCCAAAAACCCCTCTTCCTCCACTCTCCCAACCACTCTCTGTCACCGACTACACCCTCTCTCTAATCCCCTCCACCTCCCTCTCCGCCACCGCCATGATCGACTCCGACACCGACACCCACCTCTCCTACTCCGTCTTCATCCGCCAAATTAAATCCCTCTCTTCCTCTCTCAAATCCCTCTTCCCTTCTCTCTCTAAAGGCCACGTGGCACTCATCATCTCACCTTCTTCCCTTCACGTCCCCGTACTCTATTTCTCCCTCCTCTCCCTCGGTGTTGTTGTCGCTCCTGCTAACCCGCTCAGTACCCATTCCGAGTTGACTCACCATGTTCAACTCACTAAACCCGTCATCGCTTTCGCTACTTCCTCAACTTCAACTCACATTCCAAATCTCAAATTCGGCACTGTTTTGATCGACTCACCTCAATTCATTTCAATGCTCAATAACTTCAACAACTCAGAACCTCCACGAGTTGAAGTGGCTCAGTCTGACGTGGCCGCGATTCTCTTCTCTTCCGGAACCACTGGCCGAGTCAAGGGCGTGGAACTCACGCATCGGAATTTCATAGCATTAACGGGAGGTTTCTATTACACAAATCTCATGTTAGGAAATCTAGATGAAAAAGAATCGAATAAAGTGTCTCTGTTCACGCCTCCGCTATTCCACGTGTTCGGGTTCTTCATGATGGTGTGGACAATAGCGTTTGGAGAGACACTGGTGTTAATGAAGAGGTTTGATTTCGAAGGAATGCTGAAGTTGGTGGAGAAGTATAGGATCGATTCTATACCGGTGTCACCACCGCTTGTGGTGTTGCTGGCGAAGTCGGAGCTGGTGAATAAATACGATGTTAGCTCGCTGAAGATAGTTGGGTGCGGTGGTGCGCCGCTTGGGAAGGAGGTTGGGGAGAGCTTTGCTGCTAGATTTCCTAATGTTATAATTGAGCAGGGTTATGGTCTGACTGAAAGTACAGGAGCAGCAGTAAACGGAATAGGGGCTGAGGAGGGTAAAGTCCATGCTTCTGCAGGTCGACTTTCAGAAAATATGGAAGCCAAGATTGTGGACCCACTCACCGGAAAAGCATTGTTTCCTGGCCAAAAGGGTGAGTTATGGCTACGAGGTCCAACAATCATGAAAGATCTGGGTGTAGCACCATCAACAATCTTATTGGGCTTAGAGGAAAGCATAATATCTTTGATTAATTGCAATGCATTTCATGTTGCCAGTGCAGGTTACATAGGGGATGATAAGGCAACAGCTGAAATATTGGATTCAGAAGGATGGCTCAAGACTGGTGATCTTTGTTATTTTGACTCTCATGGTTTTCTTTACATTGTAGATAGACTCAAGGAATTAATTAAATACAAGGCTTATCAGGTTCCCCCAGCTGAATTGGAACATATACTTTATACCAATCCTGAAATTGCTGATGTTGCAGTGGTTCCGTATCCTGATGAAGAGGCAGGGCAGATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAGCAACATCACTGCAGCTCAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCACCATACAAGAAGATTAGGCGTGTTGCATTTATCAACTCTATCCCAAAGTCACACTCTGGCAAAATTTTGAGAAGAGAATTAGTTGCTTATGCTCTATCTAGTGGTTCTTCGAAATTGTGA 1761 0.4656 MGNQPETHPNPTIDPKSGFNSETRTFQSLRPKTPLPPLSQPLSVTDYTLSLIPSTSLSATAMIDSDTDTHLSYSVFIRQIKSLSSSLKSLFPSLSKGHVALIISPSSLHVPVLYFSLLSLGVVVAPANPLSTHSELTHHVQLTKPVIAFATSSTSTHIPNLKFGTVLIDSPQFISMLNNFNNSEPPRVEVAQSDVAAILFSSGTTGRVKGVELTHRNFIALTGGFYYTNLMLGNLDEKESNKVSLFTPPLFHVFGFFMMVWTIAFGETLVLMKRFDFEGMLKLVEKYRIDSIPVSPPLVVLLAKSELVNKYDVSSLKIVGCGGAPLGKEVGESFAARFPNVIIEQGYGLTESTGAAVNGIGAEEGKVHASAGRLSENMEAKIVDPLTGKALFPGQKGELWLRGPTIMKDLGVAPSTILLGLEESIISLINCNAFHVASAGYIGDDKATAEILDSEGWLKTGDLCYFDSHGFLYIVDRLKELIKYKAYQVPPAELEHILYTNPEIADVAVVPYPDEEAGQIPMAFVVRKPGSNITAAQVMEFVAKQVSPYKKIRRVAFINSIPKSHSGKILRRELVAYALSSGSSKL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0860 586 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 409 - -
Lal17g0860 586 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 438 575 - -
Lal17g0860 586 CDD 4CL 36 574 - -
Lal17g0860 586 Pfam AMP-binding enzyme C-terminal domain 493 568 IPR025110 -
Lal17g0860 586 SUPERFAMILY Acetyl-CoA synthetase-like 59 408 - -
Lal17g0860 586 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Lal17g0860 586 Pfam AMP-binding enzyme 58 408 IPR000873 -
Lal17g0860 586 Pfam AMP-binding enzyme 439 484 IPR000873 -
Lal17g0860 586 Gene3D - 479 580 IPR045851 -
Lal17g0860 586 Gene3D - 24 478 IPR042099 -
Lal17g0860 586 MobiDBLite consensus disorder prediction 1 39 - -
Lal17g0860 586 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 438 575 - -
Lal17g0860 586 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 28 409 - -
Lal17g0860 586 SUPERFAMILY Acetyl-CoA synthetase-like 438 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0860 Lal-Chr17 6551154 6557699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0860 6 586 Monolignol Biosynthesis Gene Families AT5G63380 54.882 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0860 K01904 - gmx:100777435 773.081