Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0857 ATGGGGCTCCATTACTTGGTATTGTTATTCAGTTCTATTTGGATAGTGTTTTCTATGAGTAAATGTTGTGCTCAATTGCAATCTTCTCAGACTGAAGTGCTTCTTCAGTTGAAAAAGCACTTGGAGTATCCAAAACAATTGGAAATATGGAAAGATAGATGGACAGAACTTTGCTCTATATCTTCTTCTGCACAAGTGAATGTTTCATGCAAGGACAATTTTGTTACTAGCCTCATCATTTTGGGTGATAAACCAACCCAAGTTAGAGATTTTGATGGGTTTGTTATTCCAAATCAAACACTATCACAAAGCTTCTCTATGGACTCTTTTGTTGCCACACTTTCAAGGTTAACTAACCTTAGAGTTCTTTCTCTTGTTTCTTTGGGCATTTGGGGTCCACTCCCTGATAGAATTCATAGACTCTTTGGACTTGAACATTTGGACTTGAGTTCTAACTATCTTTATGGATCAATCCCTCCGAAGATTTCGACACTGGTGAATCTTAAAACTCTTACATTGGGTGATAACTTCTTCAATGACACCATCCCAACCTTGTTCAACTCATCAAGTAATCTTAAAGTTCTTATTTTGAAGAATAACAGGTTGAAAGGTCCATTTCCATCTTCAATCCTTAGCATCACCACCCTCACTTACATTGACATCTCAAGAAATCAAATATCAGGTAGCTTGCAAGATTTCACTGGTTTGAGTAGTTTGGAACAGTTAGATTTAAGCAATAATAGATTCGACTTGTCGCTACCCTCGATGCCGAAAGCATTGATAAGACTTTCCCTAAGCAGAAACTCCTTCTCAGGTGAAATTCCCAAGCACTATGGTCAACTAATTAGTCTTCAGCAGCTTGATGTTTCCTTCAATTCACTCACAGGAACTGCTCCTGCTGAAATTTTCTCTTTGCCGAACATCACTTACTTGAATTTATCATCCAACTTGTTAAGTGGATCACTTCAAAATCACATAAGGTGTAAGAACCAGCTTAAATTTGTTGACATATCATATAATAAATTAGTGGGAATTTTGCCTTATTGTATAAGCAATAAGTCAGAAAATAGAGTTGTTAAGAGTGATGGAAATTGTTTATCTGGGAATGTGCAGCATCAGAATGCAGTACCTTACTGCACAGAAACTCATGTGATGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTGCCATTGTGGGAGTTCTTATGATCATTGTGGTTTTGGCTTTGTGCATTGTTGTGACTTGGAGAAGATATTTCACTGGGGGAATGCAAGAGCAGCATCTATTGCATAAAACAGTTCAAGATAACTACTCAGCAGGGTTCTCCTCTGATCTTGTAACAAATGCAAGGTATGTTTCTGAAACTGCGAAGTTAGGCAGACAAGACTTCCCGGTGTGCCGATCATATTCATTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCTACATTTATGGGTGAAAATTTATATGGGAAGCTTTACAAAGGAAAACTGGAGAGTGGGATTCAAGTTGTAATAAGGTGCTTGCCTCTGTCCAAAAAATATTCGATTCGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTTCGTCACCCGCATTTGATGTCCCTCTTGGGGCACTGCATTGATGGTGTTATTGGAGAGCATAATGACACAAAGGTTTATCTGCTTTATGAATGTGCATCAAATGGGACTTTTCAGACTTATCTCTCAGGAAACAGTTCCGGCAAGATTTTTAATTGGTCAGAGAGATTGTCAGTTCTAATTAGTATTGCCAAGGCTGTCCACTTCCTACACACTGGAATGATACCTGGTTTCTTCAAAAACAGACTTAAGATAAACAATATTTTGCTTAATGAGCAATGGATTGCAAAGTTAAGTGACTATGGATTGTCCATTATCTCAGAAGAAACTGATGCATGTGGGGTAACCGGAGAAAGTCCGAATTCATGGCAAATGAAAAAGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTATTTGAGGCACTTGTTGGATCTTCAGGATCTGCAGCTTTGCTGAATGCAATGGCATCTTTCAGTAGTCAAGAAGATGGCTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTGTAGAGAATCTGTGTTTATTGTGATTTCCATAACAAACAAAATTGTTTCTCCCGAGTCCTGGAGCCGACCATCGATCGAAGATGTCCTCTGGAACTTGCAGTATGCTTCTCAAGTCCAAGCAACAGCTGAGGGGGATTAG 2271 0.3875 MGLHYLVLLFSSIWIVFSMSKCCAQLQSSQTEVLLQLKKHLEYPKQLEIWKDRWTELCSISSSAQVNVSCKDNFVTSLIILGDKPTQVRDFDGFVIPNQTLSQSFSMDSFVATLSRLTNLRVLSLVSLGIWGPLPDRIHRLFGLEHLDLSSNYLYGSIPPKISTLVNLKTLTLGDNFFNDTIPTLFNSSSNLKVLILKNNRLKGPFPSSILSITTLTYIDISRNQISGSLQDFTGLSSLEQLDLSNNRFDLSLPSMPKALIRLSLSRNSFSGEIPKHYGQLISLQQLDVSFNSLTGTAPAEIFSLPNITYLNLSSNLLSGSLQNHIRCKNQLKFVDISYNKLVGILPYCISNKSENRVVKSDGNCLSGNVQHQNAVPYCTETHVMKKSYRVGIFVGAIVGVLMIIVVLALCIVVTWRRYFTGGMQEQHLLHKTVQDNYSAGFSSDLVTNARYVSETAKLGRQDFPVCRSYSLEELKEATNNFDNSTFMGENLYGKLYKGKLESGIQVVIRCLPLSKKYSIRNFKLRLDLLAKLRHPHLMSLLGHCIDGVIGEHNDTKVYLLYECASNGTFQTYLSGNSSGKIFNWSERLSVLISIAKAVHFLHTGMIPGFFKNRLKINNILLNEQWIAKLSDYGLSIISEETDACGVTGESPNSWQMKKLEDDVYSFGFILFEALVGSSGSAALLNAMASFSSQEDGWKQIVDPVVQATCCRESVFIVISITNKIVSPESWSRPSIEDVLWNLQYASQVQATAEGD 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0857 756 ProSiteProfiles Protein kinase domain profile. 482 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0857 756 PANTHER OS07G0166700 PROTEIN 5 756 IPR045272 GO:0004714|GO:0006468
Lal17g0857 756 SUPERFAMILY L domain-like 114 371 - -
Lal17g0857 756 Gene3D Ribonuclease Inhibitor 258 393 IPR032675 -
Lal17g0857 756 Gene3D Phosphorylase Kinase; domain 1 446 563 - -
Lal17g0857 756 SUPERFAMILY Protein kinase-like (PK-like) 465 744 IPR011009 -
Lal17g0857 756 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Lal17g0857 756 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Lal17g0857 756 Pfam Protein tyrosine and serine/threonine kinase 488 678 IPR001245 GO:0004672|GO:0006468
Lal17g0857 756 PANTHER BNAA09G06560D PROTEIN 5 756 - -
Lal17g0857 756 SMART LRR_typ_2 141 165 IPR003591 -
Lal17g0857 756 SMART LRR_typ_2 281 305 IPR003591 -
Lal17g0857 756 SMART LRR_typ_2 236 263 IPR003591 -
Lal17g0857 756 Gene3D Transferase(Phosphotransferase) domain 1 565 755 - -
Lal17g0857 756 Gene3D Ribonuclease Inhibitor 26 257 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0857 Lal-Chr17 6492189 6496495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0857 3 690 Miscellaneous Gene Families AT5G14210 49.859 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lal17g0857 PK_Tyr_Ser-Thr 6.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0857 - - gmx:100802978 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0857 17 6492189 6496495 Lal17g0857 17 6492189 6496495 ECH