Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0854 ATGGCAGTTACTCTTTACAGTCCTACCTCTGAATCTGGATTGCAGAAGCTTGATGAGTACCTTCTAACCCGTAGTTATATCTCTGGGTACCAAGCCTCAAAGGATGATCTTACTGTGTATGCACTTTTGACTGGGGTTCCGTCCGATAAGTATGTCAATGTGTCTAGGTGGTACAACCACATTGATGCTTTGTTGAGAATTTCGGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTGGAGGGATCTGCTCTTGTAGCAGATGAGACTATTGCTACTCCCCCTGTTGCTGACACAAAGGCTACCACTGCTGAGGATGATGACGATGATGATGTGGATTTGTTTGGTGAAGAGACCGAGGAAGAGAAGAAGGCAGCTGAGGAACGGGCTGCTTCTGTGAAGGCATCTGGAAAGAAGAAAGAGTCTGGGAAATCATCTGTTCTATTGGATGTGAAGCCATGGGATGATGAAACCGACATGAAAAAGCTTGAAGAAGCAGTGAGAAGTGTTAATCAAGAAGGGCTTCTTTGGGGTGCATCCAAACTTGTTGCTGTTGGGTATGGTATCAAGAAACTGCAAATTATGCTTACTATTGTGGATGACCTTGTCTCTGTCGACGATCTCATTGAGGAAACTCTTACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATCGTTGCCTTCAATAAAATATGTAAGCATTTGAGATTAAAACTCAAATTCACTGGATCTGAAGATGATGCTATGAGGAAAGTTGCAAGTTTCTGGCATTATGTTCTATGCATACTGTTTCCTTAG 801 0.4332 MAVTLYSPTSESGLQKLDEYLLTRSYISGYQASKDDLTVYALLTGVPSDKYVNVSRWYNHIDALLRISGVSGEGSGVTVEGSALVADETIATPPVADTKATTAEDDDDDDVDLFGEETEEEKKAAEERAASVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVNQEGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLIEETLTVEPINEYVQSCDIVAFNKICKHLRLKLKFTGSEDDAMRKVASFWHYVLCILFP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0854 266 MobiDBLite consensus disorder prediction 90 137 - -
Lal17g0854 266 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 107 115 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lal17g0854 266 CDD EF1B 141 232 IPR014038 GO:0003746|GO:0006414
Lal17g0854 266 Gene3D - 136 232 IPR014717 -
Lal17g0854 266 Coils Coil 115 135 - -
Lal17g0854 266 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 237 - -
Lal17g0854 266 MobiDBLite consensus disorder prediction 117 137 - -
Lal17g0854 266 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 237 - -
Lal17g0854 266 Pfam EF-1 guanine nucleotide exchange domain 145 232 IPR014038 GO:0003746|GO:0006414
Lal17g0854 266 SMART EF1_GNE_2 143 232 IPR014038 GO:0003746|GO:0006414
Lal17g0854 266 MobiDBLite consensus disorder prediction 102 116 - -
Lal17g0854 266 Gene3D - 2 78 - -
Lal17g0854 266 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 221 232 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lal17g0854 266 SUPERFAMILY GST C-terminal domain-like 10 67 IPR036282 -
Lal17g0854 266 SUPERFAMILY eEF-1beta-like 140 232 IPR036219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0854 Lal-Chr17 6463976 6466381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0854 9 232 Eukaryotic Initiation Factors Gene Family AT2G18110 79.464 1.11e-110 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0854 K03232 - thj:104804253 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0854 17 6463976 6466381 Lal17g0854 17 6463976 6466381 ECH