Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0831 ATGATGGCAAATTCAGATAGCTCTATAGTTGAACTTAATATAAGACAAGGAGAACCAACTCTAGTTAAGGCTTCAATTGAAACAGAAAAGACACTCTACTTCCTTTCAAACCTTGACCAGAACATTGCAGTTCCTCTTAGTACAGTTTATTGCTTCAAATCTTCTTCAAGAGGAAATGAGGATGCTGCACAAGTTATCAAAGATGCATTGTCAAAGATTCTTGTCCCTTATTACCCTATGACTGGAAAATTGATTATTAGCTCAGAAGGGAAGTTGATAGTAGAATGCCCAGGGGAAGGTGCTGTTTTTGTTGAGGCTGAAGCAAACTGTAATATAGAAGACATAGGAGACTTGACAAAGCCTGATCCTTCTACTCTTGGGAAACTGGTTTATAACACTCCTGGTGCTAAGAACATTCTTGAGATGCCTCTTATGGCTGTTCAGGTGACTAAGTTCAAATGTGGAGGATTCACTTTGGGGCTAAACATGATCCATTGCATGAAAGATGGAATATGTGCAATGGAATTTGTGAATGCATGGAGTGAAACAGCCAGAGGTTTGAAATCTATTCCACCATTTCTTGATCGAACCATACTCAAAGCACGTGACCCTCCCAAAATAGAATTCACACACCATGAATTTGATGAAGTTGTTGATATATCAGACACTAAAATACTTTATGAAGAAGAGGAGATACTCTACAAATCCTTCCCTTTTGAACCTGAAAAGCTTGACCTTCTTAAGAAAAAGGCCACTGAAGATGGGGTTTTGGAGAAGTGCTCTTCTTTTGAAGCCCTCTCAGGTTTTGTATGGAGAGCTAGAACTGAAGCATTAAGGATGCAACCTGATCAGGAAACAAAGCTACTCTTTGCTGTTGATGGAAGGTCTAGATTTGTGCCCCCAATACCAAAGGGTTACTTTGGAAATGCTATTGTGCTCACAAATTCCATAAGCAAAGCAGGTGAGCTATTGAAGAATCCTCTGTCATATACAGTGGAATTGATTCAGAAGGCCATTGAAATGGTCACAGACAGTTACATGAGATCTACCATTGACTACATTGAAGTAACAAGGGAAAGACCTTCCCTAACAGCTACCCTTTTGATCACAACTTGGACTAGGCTATCTTTCCACACTACAGATTTTGGATGGGGTGAACCTCTATGTTCTGGTCCAGTGACCTTGCCAGAGAAAGAAGTCATTTTGTTCTTATCACATGGTCATGAAAGGAAAAGTGTTAATGTGCTTCTTGGTTTGCCTGCTTCTGCCATGGAAATTTTTGAAGCATTGGTGATGCAACTATGA 1305 0.3985 MMANSDSSIVELNIRQGEPTLVKASIETEKTLYFLSNLDQNIAVPLSTVYCFKSSSRGNEDAAQVIKDALSKILVPYYPMTGKLIISSEGKLIVECPGEGAVFVEAEANCNIEDIGDLTKPDPSTLGKLVYNTPGAKNILEMPLMAVQVTKFKCGGFTLGLNMIHCMKDGICAMEFVNAWSETARGLKSIPPFLDRTILKARDPPKIEFTHHEFDEVVDISDTKILYEEEEILYKSFPFEPEKLDLLKKKATEDGVLEKCSSFEALSGFVWRARTEALRMQPDQETKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSISKAGELLKNPLSYTVELIQKAIEMVTDSYMRSTIDYIEVTRERPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGHERKSVNVLLGLPASAMEIFEALVMQL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0831 434 Pfam Transferase family 19 428 - -
Lal17g0831 434 Gene3D - 222 433 IPR023213 -
Lal17g0831 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 431 - -
Lal17g0831 434 Gene3D - 8 216 IPR023213 -
Lal17g0831 434 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 13 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0831 Lal-Chr17 6178276 6181947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0831 10 434 Monolignol Biosynthesis Gene Families AT5G48930 36.629 8.89e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0831 K15400 - gmx:100794490 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0831 17 6178276 6181947 Lal17g0831 17 6178276 6181947 ECH