Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0819 ATGAAGTTGGCAACAATGAAATCCAACACTAATGCCAAAATGGTTATGGTGTTAATACTGAATCTGAGTTTGGTGTTCCCTTATTGTTATTGTTATCATCATAATCATGCAGATAGCATTGTTTCTCTTCCTGGCCAACCACCTCACATAGATTTTCAACACTTCTCAGGATATGTCACACTTGATAACAATAATCAAAAGGCTCTTTTTTACTATTTTGTTGAATCTATAACTGACCCTTCTTCAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTTTGGGAGTGGGAGCATTCTCTGAAAATGGACCCTTTACACCAAATGAAGAATTTCTGATTCAAAATGAGTATAGTTGGAATAGAGAGGCAAATATGCTGTATTTGGAGACACCAGTTGGAGTAGGATTCTCTTATTCTAAGGGTAGTTCCTCATATATGACAATGAATGATGAGGCAACAGCTAGGGACAATGTTGTATTCCTGCAAGGCTGGTTCAACAAATTTCCACAATATAGGAACAGAGATTTGTTTCTAACTGGAGAAAGTTATGCAGGACATTATGTTCCTCAGCTGGCAAAGCTCATGATTGAAATGAATAGAAAGAACAAGATATTCAATCTGAAAGGCATAGCACTAGGTAATCCAGTTCTAGAATATGCCACTGATTTTAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGACTAATATCGGATTCGACATTCAATATGTTCACTAAAGTTTGCAACTATTCTCGATACGTTAGCGAATACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAAAGAAACTAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAAGTTATTAGTCCTCGAACTAAAATCGAACGCGCAAGTGAAAGGATAGATGTATGTGTAGATGACAAGGTTACCAACTACTTAAACCGAAGAGATGTACAAGATGCACTTCATGCCAAGCTTGTTGGAATTCGCAAGTGGGGTGTCTGCAGCGACATCCTAGACTATGATATGCTTAATGTGGAATTGCCAACACTTCCTATTGTTGGATCACTTGTAAAAGCTGGAGTTAGAGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCGCTGACCGGAAGCCGAAGATTGGTTCAAAAGTTGGCAACACAATTAGGACTGAATACAACAGTTCCTTACAGAGTATGGTTTGGAGGCCAGCAGGTTGGAGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCAACAGTTAGAGGTGCTGCCCATGAAGTCCCTTTTTCACAGCCAGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGGGCTTTACCTGAAATTTTTTAA 1425 0.3902 MKLATMKSNTNAKMVMVLILNLSLVFPYCYCYHHNHADSIVSLPGQPPHIDFQHFSGYVTLDNNNQKALFYYFVESITDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFTPNEEFLIQNEYSWNREANMLYLETPVGVGFSYSKGSSSYMTMNDEATARDNVVFLQGWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNRKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTFNMFTKVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVISPRTKIERASERIDVCVDDKVTNYLNRRDVQDALHAKLVGIRKWGVCSDILDYDMLNVELPTLPIVGSLVKAGVRVLIYSGDQDSVIPLTGSRRLVQKLATQLGLNTTVPYRVWFGGQQVGGWTQVYGNILSFATVRGAAHEVPFSQPERSLVLFKSFLEGRALPEIF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0819 474 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Lal17g0819 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 472 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 Pfam Serine carboxypeptidase 44 467 IPR001563 GO:0004185|GO:0006508
Lal17g0819 474 Gene3D - 322 358 - -
Lal17g0819 474 PANTHER CARBOXYPEPTIDASE 33 472 - -
Lal17g0819 474 Gene3D - 368 467 - -
Lal17g0819 474 SUPERFAMILY alpha/beta-Hydrolases 40 470 IPR029058 -
Lal17g0819 474 Gene3D alpha/beta hydrolase 32 306 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0819 Lal-Chr17 6027015 6030744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0819 330 470 Calmodulin-binding Proteins AT2G22960 26.950 4.72e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0819 K16297 - gmx:100795668 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0819 17 6027015 6030744 Lal17g0819 17 6027015 6030744 ECH