Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0800 ATGGAAAATCCCAACACTTCCAGCACCAGCACAAGCACAAGCATACCACCCAACCCCATGTGGGTTTTCCCTAATAGAACCAAGAACCTCACTGAACTCTACACACTAGGAAGAGAACTTGGTTACGGCACATTTGGAACCACATACCTATGCACTGAAAAATCCACTGGTTGCATTTATGCCTGCAAGACAATCCCAAAAAAGAAGCTTTTGCTTGAAAAGGACTATGAAGATGTAAGAAGGGAGGTTCAGATAATGCACCACTTGGCTGAGACTCCAAATGTTGTGAAGATTCATGGTACCTATGAGGATTCATCTAGTGTTCACTTGGTTATGGAGTTTTGTGAAGGAGGTGAGTTGTTTGATAGAATTTTGAGTAAAGGGCATTATAGTGAGAGAGAAGCTGCTAAGTTGATGAAGACCATTGTTGAGGTTGTGGAGGCTTGTCACTCTCTTGGTGTTATACATAGAGACCTTAAGCCTGAGAATTTCTTGTTTGATACTGTTCAAGAAGATGCTAAACTCAAAGCCACTGATTTTGGGTTGTCTCTCTTTTACCAACCAGGTGCAACCCTTAGTCATGCTGCTGGAAGCTTATACTATGTTGCCCCGGAGGTCTTTCAGAAGAATTATGGACCCGAAACGGATGTGTGGAGCGCCGGGGTTATTTTGTACATTCTATTATGCGGGGATCTACCATTTGAGGCTAAAACTGAAATTTTAGGAGGAGAACTTAGGTTTGAGAAAGAACCATGGCCTAGCATTTCAGACAGCGCCAAGGATTTGATTCGGAAAATGCTCGATCGAAATCCAAAAACAAGACTTACAGTTCATGAATTGAAGGATATAGCACTAAAGTGGTTCTCTGTTTCAGGCCACCCATGGATAGTTGACGACAACATCGCACCAGATAAGCCTCTTGATTCTGCAGTTTTAACACGCTTGAAGCAGTTCTCTGCAATGAATAAGCTTAAAAAGGTTGCTTTGCGTGTTATTGCTGAGAGGCTTTCTGAGGAAGAAATTGCTGGTCTTAAGGAGTTATTTAAGATGATTGATACTGACAAAAGTGGAACTATAACATTTGATGAGCTAAAAGACGGCTTAAAGCGCGTAGGAGCTGAACTTCTCGAGTCCGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAGCGGGACGATCGACTATGGCGAATTCATCGCTGCAACGCTTCACTTAAATAAGCTTGAGAGAGAGGAAAACCTGATGTTAGTGTTCTCCTATTTTGACAAAGATGGTAGTGGTTACATAACCATTGATAAGATTCAACAAGCTTGTAAGAATTTTGGTATGAATGATATGCATATTGATGAAATGGTCAAGGAAATATTCCACGACGACGATATACAAATAAATTATGAGGAATTTGCTGCAATGATAAGAAAGAACAATGGAGGGACTGGAAGGAGAACAATGAGAAGCACACTCAATTTCTAA 1479 0.4091 MENPNTSSTSTSTSIPPNPMWVFPNRTKNLTELYTLGRELGYGTFGTTYLCTEKSTGCIYACKTIPKKKLLLEKDYEDVRREVQIMHHLAETPNVVKIHGTYEDSSSVHLVMEFCEGGELFDRILSKGHYSEREAAKLMKTIVEVVEACHSLGVIHRDLKPENFLFDTVQEDAKLKATDFGLSLFYQPGATLSHAAGSLYYVAPEVFQKNYGPETDVWSAGVILYILLCGDLPFEAKTEILGGELRFEKEPWPSISDSAKDLIRKMLDRNPKTRLTVHELKDIALKWFSVSGHPWIVDDNIAPDKPLDSAVLTRLKQFSAMNKLKKVALRVIAERLSEEEIAGLKELFKMIDTDKSGTITFDELKDGLKRVGAELLESEIKDLMDAADIDNSGTIDYGEFIAATLHLNKLEREENLMLVFSYFDKDGSGYITIDKIQQACKNFGMNDMHIDEMVKEIFHDDDIQINYEEFAAMIRKNNGGTGRRTMRSTLNF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0800 492 ProSitePatterns Protein kinases ATP-binding region signature. 40 68 IPR017441 GO:0005524
Lal17g0800 492 Gene3D Phosphorylase Kinase; domain 1 36 119 - -
Lal17g0800 492 Pfam EF-hand domain pair 344 404 IPR002048 GO:0005509
Lal17g0800 492 CDD EFh 344 403 IPR002048 GO:0005509
Lal17g0800 492 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Lal17g0800 492 SMART efh_1 343 371 IPR002048 GO:0005509
Lal17g0800 492 SMART efh_1 449 477 IPR002048 GO:0005509
Lal17g0800 492 SMART efh_1 415 443 IPR002048 GO:0005509
Lal17g0800 492 SMART efh_1 379 407 IPR002048 GO:0005509
Lal17g0800 492 Gene3D - 290 478 - -
Lal17g0800 492 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Lal17g0800 492 Pfam EF hand 419 434 IPR002048 GO:0005509
Lal17g0800 492 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Lal17g0800 492 ProSiteProfiles EF-hand calcium-binding domain profile. 339 374 IPR002048 GO:0005509
Lal17g0800 492 SUPERFAMILY Protein kinase-like (PK-like) 7 314 IPR011009 -
Lal17g0800 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Lal17g0800 492 SUPERFAMILY EF-hand 335 477 IPR011992 -
Lal17g0800 492 ProSiteProfiles Protein kinase domain profile. 34 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0800 492 SMART serkin_6 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0800 492 ProSitePatterns EF-hand calcium-binding domain. 352 364 IPR018247 -
Lal17g0800 492 Pfam Protein kinase domain 34 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0800 492 Gene3D Transferase(Phosphotransferase) domain 1 120 289 - -
Lal17g0800 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 482 - -
Lal17g0800 492 CDD STKc_CAMK 34 295 - -
Lal17g0800 492 PANTHER BNAA09G05220D PROTEIN 20 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0800 Lal-Chr17 5868487 5872117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0800 1 492 EF-hand Containing Proteins AT4G09570 67.671 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal17g0800 Pkinase 8.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0800 K13412 - gmx:100805961 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0800 17 5868487 5872117 Lal17g0800 17 5868487 5872117 ECH