Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0784 ATGGCAGCAAAAATTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACAGCTACTACTCCATCATCCACCACCACCATCAACAAAAACCACTACCAGATTCTATTCATCAAAACCTTCATATCCTTCTTCTCGTTCTTTCAACACCTCCTCTCGCTCCAACACCTTCACCGTCTTCTCTCAGCTTGCTTCCACCGTCTCCGACCTCGATTCCGCCGCCAACGCTGGCCACCAACGTCTCTCTAAGGTTCCTGTGTCTAATATAAGGAACTTCTCCATCATTGCTCATATTGATCATGGAAAATCTACCTTGGCTGATAAATTGCTTCAAGTTACGGGAACTGTGCCCCAGAGAGAGATGAAGGAACAGTTCCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGTTATGTATTCGAAAATGAACCATATTGCTTAAATCTAATTGATACTCCGGGGCATGTCGACTTCTCATATGAGGTTTCTCGATCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGGGTCGAAGCACAAACACTAGCTAATGTTTATTTAGCCTTAGAGAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCAGGTGCAGAACCAGATCGAGTTATCAAGGAGATTGAGGAGGTTGTAGGTCTAGACTGTAGCGATGCGATTCTCTGCTCTGCAAAGGAAGGTGTAGGTATAATTGATATTCTCAATGCAATTGTTGCAAGAATCCCCCCACCTGCTAATACATCTGAAAGGCCATTGAGGGCATTAATATTTGATAGCTACTATGATCCATATAGAGGTGTTATTGTATACTTCCGAGTTGTAGATGGGACTATTAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGAAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAATTACAAGTTGACGAATTGTCTGCTGGTGAGGTGGGCTATCTATCTGCATCAATAAGAACAGTTGCTGATGCTAGAGTGGGTGACACTATTACTCACTATGGCAGAAAGGCGGATAATTTACTCCCTGGATATGAAGAAGCCACTCCTATGGTGTTTTGTGGCTTGTTTCCTGTTGATGCTGACCAATTTCCCGACCTACGTGATGCACTTGAGAAGCTACAACTCAATGATGCAGCACTGAAGTTTGAACCTGAGACCTCGAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTTCAGGAGAGACTCGAGAGAGAATACAATTTGAGCTTGATAACTACTGCTCCGAGTGTTGTATACAAAGTGAACTGTCTAAATGGTGATACTGTTGAATGCTCAAATCCATCATTACTTCCCGAGCCTGCAAAAAGGAAATCAATTGAGGAGCCAGTTGTTAAGATTGAGATGCTTACACCAAAGGACTACATCGGTTCACTCATGGAACTAGCACAAGACAGAAGAGGGAAGTTCAAAGAAATGAAATTTATCACTGAAATTAGGGCATCACTCACATATGAGTTACCACTAGCAGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTATGCTAGTATGGAGTATAACTTTATCGGGTACAACGAAAGCGATTTAATTAAACTTGACATACTGATAAACGGTGATCATGTGGATCCATTGGCTACAATTGTGCACAGAGACAAGAAAATTAACAGAGGCTTGTACTTTCAGGCATATTCTGTAGGAAGGGCTTTGACGCTAAAGCTGAAAGAGCTCATACCAAGACAAATGTTTAAAGTACCAATTCAAGCAACCATAGGGTCAAAAGTGATTGCTAGTGAAACTATATCTGCAATAAGGAAGGATGTATTAGCCAAATGCTATGGTGGGGACATTACAAGGAAAAAGAAATTGCTTAGGAAACAGGCCGAAGGAAAGAAAAGGATGAAGTCTATTGGCAAAGTTGATGTGCCTCAAGAGGCTTTCATGGCGGTTTTGAAACTTGAAAAAGAGGTCATATGA 2082 0.4169 MAAKICGGSLFLSVKTQQLLLHHPPPPSTKTTTRFYSSKPSYPSSRSFNTSSRSNTFTVFSQLASTVSDLDSAANAGHQRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVPQREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSDAILCSAKEGVGIIDILNAIVARIPPPANTSERPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQVDELSAGEVGYLSASIRTVADARVGDTITHYGRKADNLLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYKVNCLNGDTVECSNPSLLPEPAKRKSIEEPVVKIEMLTPKDYIGSLMELAQDRRGKFKEMKFITEIRASLTYELPLAEMVGDFFDQLKSRSKGYASMEYNFIGYNESDLIKLDILINGDHVDPLATIVHRDKKINRGLYFQAYSVGRALTLKLKELIPRQMFKVPIQATIGSKVIASETISAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0784 693 Gene3D Elongation Factor G (Translational Gtpase), domain 3 370 451 - -
Lal17g0784 693 Gene3D - 564 647 IPR038363 -
Lal17g0784 693 PANTHER TRANSLATION FACTOR GUF1-RELATED 77 687 IPR006297 GO:0005525
Lal17g0784 693 Pfam Elongation factor Tu domain 2 289 359 IPR004161 GO:0005525
Lal17g0784 693 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 87 268 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 CDD LepA 90 267 - -
Lal17g0784 693 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 127 142 IPR031157 -
Lal17g0784 693 CDD lepA_C 485 564 IPR035654 -
Lal17g0784 693 Pfam GTP-binding protein LepA C-terminus 572 687 IPR013842 -
Lal17g0784 693 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 81 690 IPR027518 -
Lal17g0784 693 Gene3D - 452 563 - -
Lal17g0784 693 SMART EFG_C_a 482 570 IPR000640 -
Lal17g0784 693 SUPERFAMILY EF-G C-terminal domain-like 376 454 IPR035647 -
Lal17g0784 693 TIGRFAM small_GTP: small GTP-binding protein domain 90 258 IPR005225 GO:0005525
Lal17g0784 693 CDD EF4_II 275 360 - -
Lal17g0784 693 CDD EF4_III 377 452 - -
Lal17g0784 693 Pfam Elongation factor G C-terminus 483 569 IPR000640 -
Lal17g0784 693 Pfam Elongation factor Tu GTP binding domain 88 265 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 77 687 - -
Lal17g0784 693 SUPERFAMILY EF-G C-terminal domain-like 483 578 IPR035647 -
Lal17g0784 693 MobiDBLite consensus disorder prediction 22 52 - -
Lal17g0784 693 TIGRFAM lepA: elongation factor 4 88 688 IPR006297 GO:0005525
Lal17g0784 693 Hamap Elongation factor 4 [lepA]. 84 691 IPR006297 GO:0005525
Lal17g0784 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 292 IPR027417 -
Lal17g0784 693 Gene3D Translation factors 270 368 - -
Lal17g0784 693 Gene3D - 86 269 IPR027417 -
Lal17g0784 693 PRINTS GTP-binding elongation factor signature 91 104 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 PRINTS GTP-binding elongation factor signature 134 142 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 PRINTS GTP-binding elongation factor signature 158 168 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 PRINTS GTP-binding elongation factor signature 174 185 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 PRINTS GTP-binding elongation factor signature 210 219 IPR000795 GO:0003924|GO:0005525
Lal17g0784 693 SUPERFAMILY Translation proteins 266 364 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0784 Lal-Chr17 5718703 5735182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0784 89 322 Eukaryotic Initiation Factors Gene Family AT3G22980 33.198 1.76e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0784 K21594 - gmx:100784073 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0784 17 5718703 5735182 Lal17g0784 17 5718703 5735182 ECH