Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0768 ATGGGAGACGGTTCTAGCAACCGCACGAACAGCAACAGCAATAAACCTGAGTGGTTGCAACAGTATGATCTTATAGGGAAGATCGGAGAAGGAACCTACGGTCTCGTTTTCCTCGCTCGAATCAAATCTCAAGCTAATCGCGGCAAATCCATCGCCATCAAGAAATTCAAGCAATCCAAAGATGGTGACGGTGTTTCCCCCACCGCAATTCGTGAAATCATGTTGCTGAGGGAGATAATACACGAGAATGTTGTGAAGCTTGTGAATGTTCACATCAATCACACAGACATGTCTCTGTATCTGGCTTTTGATTACGCCGAACATGACCTTTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATACATCGAGATTTAAAGCCATCAAATATATTGGTTATGGGTGATGGGGAGGAACATGGGGTTGTTAAAATTGCCGACTTTGGACTTGCAAGGATATATCAAGCCCCGTTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCTGAATTGCTTCTCGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTGGGGTGCATTTTTGCTGAGTTATTGACCTTGAAGCCATTATTTCAAGGTGCAGAAGTAAAAGGTACACCAAATCCCTTTCAGCTCGATCAACTTGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGATAAGTGGCCTTCCTTGGCAAATCTTCCCCATTGGCAACAAGATGTGCAACACATACAAGGACACAAATATGACAATACTAGTCTCTGTAATGTTGTACACCTATCTCCAAAAAGTCCTGCATATGACCTGTTGTCAAAGATGCTCGAATATGATCCTCGAAAGCGTATAACAGCTGCAGAAGCTTTGGAGCATGAGTATTTCAAATTGGAACCACAACCAGGGCGGAATACACTTGTACCTTGCCAACCTGGAGAGACATTTGTGAATTATCCTACACGTCCAGTGGACACAACAACAGATTTTGAAGGGACAGCCAACTTGCAACCTCCAATGCCGGTTTCGTCTGGAGCAGGCAGCATGCCAGGTGGCCATGGGTCAAATAGAACTGTCCCTCGGCCAATGAATGTTGTTGGCATGCAAAGAATGCCTCATCAGCCAATGCAAGCTTACAATCTCGCATCTCAGGCAGGGATGGGTCCTGGAATGAATCCTGGTGGAATCCCAATGCAACGAGTTGAGAAGAAAAGACCAAATGGGGATGCCAGGATACCCTCCACAGCAGAAATCAAGACGTATATAAGGTTGGTCTGGAAGATAGAGTTAAAGGTCGACACTACTGAACTTGAGCTCATTCAGGACAATTCATGA 1443 0.4373 MGDGSSNRTNSNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQANRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREIIHENVVKLVNVHINHTDMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKGTPNPFQLDQLDKIFKVLGHPTLDKWPSLANLPHWQQDVQHIQGHKYDNTSLCNVVHLSPKSPAYDLLSKMLEYDPRKRITAAEALEHEYFKLEPQPGRNTLVPCQPGETFVNYPTRPVDTTTDFEGTANLQPPMPVSSGAGSMPGGHGSNRTVPRPMNVVGMQRMPHQPMQAYNLASQAGMGPGMNPGGIPMQRVEKKRPNGDARIPSTAEIKTYIRLVWKIELKVDTTELELIQDNS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0768 480 Gene3D Transferase(Phosphotransferase) domain 1 105 346 - -
Lal17g0768 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lal17g0768 480 SMART serkin_6 22 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0768 480 SUPERFAMILY Protein kinase-like (PK-like) 17 333 IPR011009 -
Lal17g0768 480 Gene3D Phosphorylase Kinase; domain 1 6 104 - -
Lal17g0768 480 CDD STKc_CDK8_like 21 332 - -
Lal17g0768 480 PANTHER CELL DIVISION PROTEIN KINASE 11 440 - -
Lal17g0768 480 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Lal17g0768 480 ProSiteProfiles Protein kinase domain profile. 22 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0768 480 PANTHER CYCLIN-DEPENDENT KINASE E-1 11 440 - -
Lal17g0768 480 Pfam Protein kinase domain 22 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0768 Lal-Chr17 5576793 5586968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0768 1 436 Core Cell Cycle Gene Families AT5G63610 77.201 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Lal17g0768 Pkinase 4.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0768 K02208 - gmx:100813433 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0768 17 5576793 5586968 Lal17g0768 17 5576793 5586968 ECH