Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0765 ATGAAGGGAGAGTTAGAATTACCCGCTGGTTTCAGATTCCACCCCACCGACGAGGAATTAGTGATTCACTACTTGTGTACAAAATGTGCTTCCCAATCAATTTCTGTTCCTATCATCAAAGACATCGATTTATATAAATTCGATCCATGGCACCTTCCAGAAATGGCTCTTTATGGTGAAAAGGAGTGGTACTTCTTCTCACCAAGGGACCGGAAATATCCGAACGGTTCAAGGCCGAACCGGGCTGCAGGTTCAGGTTATTGGAAAGCAACGGGAGCAGACAAACCGATTGGAAAACCGAAAGCACTTGGGATTAAGAAAGCACTTGTGTTCTATGCTGGTAAAGCCCCTAAAGGAATTAAAACCAATTGGATTATGCATGAATATCGTCTTGCCAATGTTGATAGAACCGCTTCCAACAAAATCAATAATTCAAGGCTTGATGATTGGGTGTTATGCCGAATTTACAATAAGAAAGGGAAGATTGAGAAATATAACACCACCGTTGTGAATCAAAAAGTACCAAAATTTCCAGAGAATGTTCATTTTGACCATGAGAATATTGAGACTAAGCCAGAAATTCATAAATTTGGGAATAATCAATTGTACATGGACACGTCAGATTCAGTGCCCAGGTTGCACACGTACTCCAGCTGTTCTGAGCACGTGCTTTCACCAGATGTCACGTGGGAGAAGGAGGTTCAAAGTGAGTCAAAGTTGAATAAGCTAGAGCTAGATGATAATGCATTTGATCTTCAATTCAATTACATGGATAATAGTAATAACCTGAACCTGTCTTTGGAGGATCCTTTTGGATCTCAGGCCCAATTCCAAATGAACCCATTACAAGACATGTTCATGTACCTACAGGAGCCATTTTGA 882 0.4082 MKGELELPAGFRFHPTDEELVIHYLCTKCASQSISVPIIKDIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRTASNKINNSRLDDWVLCRIYNKKGKIEKYNTTVVNQKVPKFPENVHFDHENIETKPEIHKFGNNQLYMDTSDSVPRLHTYSSCSEHVLSPDVTWEKEVQSESKLNKLELDDNAFDLQFNYMDNSNNLNLSLEDPFGSQAQFQMNPLQDMFMYLQEPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0765 293 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Lal17g0765 293 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 274 - -
Lal17g0765 293 PANTHER NAC TRANSCRIPTION FACTOR 56 5 274 - -
Lal17g0765 293 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lal17g0765 293 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Lal17g0765 293 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0765 Lal-Chr17 5564231 5566462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0765 1 293 NAC Transcription Factor Family AT1G01720 60.586 1.23e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal17g0765 NAM 6.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0765 - - gmx:100814504 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0765 17 5564231 5566462 Lal17g0765 17 5564231 5566462 ECH