Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0755 ATGTCTGGAAAGGGAAAGAGAAAGGAAGAGAATAACCACGCTTCCGACGACTCTGAAGGCCACGCGCCTCCCAATAAGGTAGCCAAGAAAGATTCCGATGACCCTGATTCCATCGTTGTATGCGAGATTTCGAAGAATAGGAGGGTTTCTGTGAGGAACTGGCAAGGCAAGATCGTTATTGACATTCGTGAATTTTATCAGAAAGATGGAAAACAATTGCCTGGCAAAAAAGGTATCTCATTGACCATGGATCAGTGGAATGTGCTTCGCGATCACATTGAAGAAATTGATGAGGCAGTTAATGAGGATTCTTAG 315 0.4381 MSGKGKRKEENNHASDDSEGHAPPNKVAKKDSDDPDSIVVCEISKNRRVSVRNWQGKIVIDIREFYQKDGKQLPGKKGISLTMDQWNVLRDHIEEIDEAVNEDS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0755 104 SUPERFAMILY ssDNA-binding transcriptional regulator domain 40 101 IPR009044 GO:0003677|GO:0006355
Lal17g0755 104 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 102 IPR045125 GO:0003713|GO:0060261
Lal17g0755 104 Gene3D Transcriptional Coactivator Pc4; Chain A 29 104 IPR009044 GO:0003677|GO:0006355
Lal17g0755 104 Pfam Transcriptional Coactivator p15 (PC4) 41 92 IPR003173 GO:0003677|GO:0006355
Lal17g0755 104 PANTHER BNAC09G47220D PROTEIN 1 102 - -
Lal17g0755 104 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0755 Lal-Chr17 5413984 5415930 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lal17g0755 PC4 6e-26 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0755 K25815 - mnt:21391299 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0755 17 5413984 5415930 Lal17g0755 17 5413984 5415930 ECH