Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0753 ATGAAGTTAATCGGCGATGACAGCAACGGCGGCCGGAAGAAAGTGTTGGTCGGAGTGAAGTTAGACAAACGGAGTATGGAACTGCTGACGTGGGCACTGGTTAAGGTTGCCGTTCCTGGTGACCTTGTCATTGCGCTTCACATTTTGGAAACCGTCCCTGAGGGAACGGCGTCGCTTCTTTCTGTCGTAAAAAGCTTCGATTCCGTTCTCTCTGGCTACGAAGGCTTCTGCAATTTACAGCAGGTTGATCTGAGGTTTAAATTGTGTAGAGGTGATTCGCCTCGGAAGGTTCTAGTACAAGAGGCAAAATCGTTTGGAGTTTCAACGGTGATTGTTGGAACTTCGAAAAAGCATCATGCTATTCGTTCTTCTTCGTCCATTGCTAAGTATTGTGGAAAGAAATTGCCTAAGTGTGTTTCTGTTTTTGCTGTTGATAATAGCAAAACTGTTTTCCGAAGAGAAGCTTCTAGAACTTGCAGTCATCAAGAAAATTTTCATGAAGGCCAAAAAAGTTCCCCGAAATTGTTTATAGCTTGTACAAAGAATTATGAAAGTTGTGAGCGCGGGTTGTCTGATGACAATCTTGTAAAAGAAAATTCACTGGCTTTGGTACCATTTCAAGGAGATGATAATGGTGATCCTGATCCTCCTAGTTATTCGATGGTGGTGAGTAATTCAAACCAGTTGAAGTCTGGTTGGTCACTCATTCGCAGAATGCTTCACCCCAGAAAGCATTCACATTCACCCAAGTCTTTGAGGAAGAGTGCATTTGATTATCAAGCCGCATTGCGACAGCCCAGCTGGAATTTTTCAGCTGTAGTCCATCCGGATCATAAACAAACTAATGATGACAAGAATGATGATTCTACCCTCGATGGGGAGAGTGGTGCTATTGTTCCATTTGGATCTAATGCTACTTTTCCTCTTCCTTCAATTTGTGGTGAAGTGACTAGTCTTCCTGAACAGTTGTTGGGCTTACAAGAGAAGTACTCATCTTTATGTACAATGTATAGTTTGCAGGAACTTGTATCTGCAACTGCTAACTTCTCACCCGATAATTTGGTTGGAAAAGGTGGTAGTAGTTATGTTTACAGAGGATTTCTGCCGGATGGCAAGGAATTGGCTGTGAAAATTTTGAAGCCATCTGAAGATGTGGTAAAAGAGTTTGTTCAGGAAATTGAGATCATCACAACCTTGCATCACAAGAACATAATATCTCTGTCTGGCTTTTGTTTTGAGAGCAACCATTTACTACTAGTTTATAAATTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGTAACAAGGACTGTTATGTGCTTGGTTGGCAAGAGAGATACCGGGTGGCTGTCGGTGTAGCTGAGGCATTGGACTATCTCCATAACCGCTATGCAGAGGCTGTGATTCATAGGGATGTGAAATCTTCCAATATCCTTCTTTCAGCTGATTTTGAGCCTCAGCTCTCAGATTTTGGATTGGCTAGTTGGAGTTCTTCTTCTTCCCATATTACTTGTACTGATGTAGCCGGAACTTTTGGATACCTTGCTCCTGAATACTTTATGCATGGTAAAGTGACTGACAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAATAGGAAACCCATTAACAATGACTGTCCAAAGGGTCAGGAGAGCCTTGTTATGTGGGCAACTCCAATTTTGAAAGATGGGAAGCTTTCCCAGTTGCTTGATCCAAGCCTAGGCAGTGATTACGACCATTGCCAGATTAAAAGAATGGTTTTGGCTGCTACTCTCTGCATTAGACGAGCACCTAAATCGCGACCTCAAATCAGCTTCATTCTAAAACTTCTACAAGGTGATGAAGAAGTGACAGCATGGGCAGAACAAGAAGTTCGTGCACCACTGGAACTTGATGGAGCTGATGGGGAACCAGTTCCGACTAATAATATCCAGTCCCATCTGAACCTTGCGTTGCTGGACTTGGAGTATGATACAGTTTCTATCAGTAGCACTGAGCAGAATGTCTCATTGGAGGACTATTTGCATGGACGATGGAGTCGCTCTTCAAGTTTTGACTAA 2082 0.4256 MKLIGDDSNGGRKKVLVGVKLDKRSMELLTWALVKVAVPGDLVIALHILETVPEGTASLLSVVKSFDSVLSGYEGFCNLQQVDLRFKLCRGDSPRKVLVQEAKSFGVSTVIVGTSKKHHAIRSSSSIAKYCGKKLPKCVSVFAVDNSKTVFRREASRTCSHQENFHEGQKSSPKLFIACTKNYESCERGLSDDNLVKENSLALVPFQGDDNGDPDPPSYSMVVSNSNQLKSGWSLIRRMLHPRKHSHSPKSLRKSAFDYQAALRQPSWNFSAVVHPDHKQTNDDKNDDSTLDGESGAIVPFGSNATFPLPSICGEVTSLPEQLLGLQEKYSSLCTMYSLQELVSATANFSPDNLVGKGGSSYVYRGFLPDGKELAVKILKPSEDVVKEFVQEIEIITTLHHKNIISLSGFCFESNHLLLVYKFLSRGSLEENLHGNKDCYVLGWQERYRVAVGVAEALDYLHNRYAEAVIHRDVKSSNILLSADFEPQLSDFGLASWSSSSSHITCTDVAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELLSNRKPINNDCPKGQESLVMWATPILKDGKLSQLLDPSLGSDYDHCQIKRMVLAATLCIRRAPKSRPQISFILKLLQGDEEVTAWAEQEVRAPLELDGADGEPVPTNNIQSHLNLALLDLEYDTVSISSTEQNVSLEDYLHGRWSRSSSFD 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0753 693 Pfam Universal stress protein family 12 139 IPR006016 -
Lal17g0753 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lal17g0753 693 Gene3D Transferase(Phosphotransferase) domain 1 424 635 - -
Lal17g0753 693 Gene3D HUPs 12 145 IPR014729 -
Lal17g0753 693 ProSiteProfiles Protein kinase domain profile. 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0753 693 SUPERFAMILY Protein kinase-like (PK-like) 330 625 IPR011009 -
Lal17g0753 693 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Lal17g0753 693 SMART serkin_6 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0753 693 CDD USP_Like 14 139 - -
Lal17g0753 693 MobiDBLite consensus disorder prediction 272 295 - -
Lal17g0753 693 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 135 - -
Lal17g0753 693 Pfam Protein kinase domain 352 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0753 693 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Lal17g0753 693 MobiDBLite consensus disorder prediction 277 291 - -
Lal17g0753 693 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 13 171 - -
Lal17g0753 693 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 212 687 - -
Lal17g0753 693 PANTHER OS01G0253100 PROTEIN 212 687 IPR045271 GO:0004714|GO:0006468
Lal17g0753 693 PANTHER OS01G0253100 PROTEIN 13 171 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0753 Lal-Chr17 5396473 5399992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0753 335 621 Trihelix Transcription Factor Family AT1G70460 44.218 3.46e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal17g0753 Pkinase 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0753 - - gmx:100815722 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0753 17 5396473 5399992 Lal17g0753 17 5396473 5399992 ECH
Lal1g0168 1 1063443 1066113 Lal17g0753 17 5396473 5399992 ECH
Lal9g0123 9 812890 819414 Lal17g0753 17 5396473 5399992 ECH