Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0747 ATGATGGCAAGTGCAAGCATCAACCTTCCTCCTGGGTTTATCTTCTCTCCAACAGATGAAGAACTTGTCTTTCATTTTCTCTATTCTAAAGCTTCTCTTCTACCATGCCATCCCAACATCATCCCTGAACTTGATCTTTCTTTTCTACATCCTTGGGAATTAAATGGTAAAGCTTTGTCAAGTGGAAATGAACACTATTTCTTCACAAAAATGAAGGAACACAGAGCCATAGAAAATGGGTATTGGAGGGAAATAGGCGTAACCTATCCTATATTCTCAGACATTGACAAGAAAGTAGGAATCAAGAAGTACCTTGTGTTCAACGTTGGAGAGGGTCCACAAGGTACTGAAACAAGTTGGGTAATGCAAGAATATCATATTTGTTCCTTTGAGTTTGACACTTCATGTTACCAAAGTAGAAGAAAACATGAACAAAGTTGGAGCAACTGGGTTTTATGTCGAGTGTATGAAAACAAGTCTCAAAACTTCTATTGCCATGACGATGACAGTGGATCAGAACTTTCATTGCTAGACGAAGTTTATATGTGCTTGGATGATGATTTGGAAGAAATAAGCATGCCAAAATAG 588 0.381 MMASASINLPPGFIFSPTDEELVFHFLYSKASLLPCHPNIIPELDLSFLHPWELNGKALSSGNEHYFFTKMKEHRAIENGYWREIGVTYPIFSDIDKKVGIKKYLVFNVGEGPQGTETSWVMQEYHICSFEFDTSCYQSRRKHEQSWSNWVLCRVYENKSQNFYCHDDDSGSELSLLDEVYMCLDDDLEEISMPK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0747 195 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lal17g0747 195 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 192 - -
Lal17g0747 195 Pfam No apical meristem (NAM) protein 10 127 IPR003441 GO:0003677|GO:0006355
Lal17g0747 195 PANTHER NAC TRANSCRIPTION FACTOR 56 4 192 - -
Lal17g0747 195 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Lal17g0747 195 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0747 Lal-Chr17 5342972 5344793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0747 8 160 NAC Transcription Factor Family AT1G61110 41.212 1.32e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal17g0747 NAM 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0747 - - gmx:100170711 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0747 17 5342972 5344793 Lal17g0747 17 5342972 5344793 ECH