Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0742 ATGGAAGTACTAGGATGCAACACCAGCAGTAGTGACAGTAAAAAGAGCTGTAGTAGAGGCCATTGGAAACCTGAAGAAGATGAGAGACTGAAGCAACTGATGATGCAGTATGGTCCTAAGAATTGGAATTTTATTTCAGAAAATATTGGAGGAAGAAGATCAGGGAAAAGTTGTAGATTAAGATGGTACAATCAACTAAGCCCAAATATCATTAAGAAACCATTGAATGATGAGGAAGAAGAAATGCTGTTAACACTCCACAAATTGAAGGGTAACAAATGGGCTACAATAGCAAAATTCTTCCCAGGAAGAACTGATAATTCTCTGAAGAATCATTTCCATGTTTTATTGGCAAGAAGAAAGAGAGCACGCTTGGCACTTTTTGGTGACAGTGTAAACCATAATTCAAGGACTAATAATTTCAACATTGGAATCTCTTCAACCATTACACCATGTTTTGATTCTTCTGGTGTTTCTTCTTCAATTGCTGGAGAGAAATACCCACTTGGTTCTTCTTCTATTCTTTCAAGTTACCAAAGCTTCACTGCTTCTGGAATTCCAAGTGTTGGCAAGGTTGTTCCCCTTCCAATTAAGTTCTCAAACTCTAGTTATAGCCACAGAATTGATGAGAACTTAATCAAAAGCACCAACACAAATAAGCATGCACGTGATGATAACTCCAAGGCAATGTTCAAGTTGAGCATGAATACTCATGAGCAAGAACAACATGAAGGTATTAATATTAAGCAAAAGGGTGTGGCCTTCATAGATTTTCTTGGAGTAGGAAGCTCTTCTGGCCATGATGACAGTATTAGTAGACCATAA 825 0.377 MEVLGCNTSSSDSKKSCSRGHWKPEEDERLKQLMMQYGPKNWNFISENIGGRRSGKSCRLRWYNQLSPNIIKKPLNDEEEEMLLTLHKLKGNKWATIAKFFPGRTDNSLKNHFHVLLARRKRARLALFGDSVNHNSRTNNFNIGISSTITPCFDSSGVSSSIAGEKYPLGSSSILSSYQSFTASGIPSVGKVVPLPIKFSNSSYSHRIDENLIKSTNTNKHARDDNSKAMFKLSMNTHEQEQHEGINIKQKGVAFIDFLGVGSSSGHDDSISRP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0742 274 Pfam Myb-like DNA-binding domain 22 83 - -
Lal17g0742 274 MobiDBLite consensus disorder prediction 1 15 - -
Lal17g0742 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 121 IPR017930 -
Lal17g0742 274 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Lal17g0742 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Lal17g0742 274 SMART sant 18 68 IPR001005 -
Lal17g0742 274 SMART sant 71 119 IPR001005 -
Lal17g0742 274 Gene3D - 74 139 - -
Lal17g0742 274 CDD SANT 76 117 IPR001005 -
Lal17g0742 274 MobiDBLite consensus disorder prediction 1 23 - -
Lal17g0742 274 Gene3D - 19 71 - -
Lal17g0742 274 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Lal17g0742 274 CDD SANT 22 64 IPR001005 -
Lal17g0742 274 PANTHER MYB TRANSCRIPTION FACTOR 9 263 - -
Lal17g0742 274 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Lal17g0742 274 PANTHER MYB PROTEIN-RELATED 9 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0742 Lal-Chr17 5291142 5292060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0742 1 265 MYB Transcription Factor Family AT4G33450 40.942 8.50e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal17g0742 Myb_DNA-bind_6 9.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0742 K09422 - qsu:112030667 198.364