Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0739 ATGCCCACGTGGTGGAGTAAAAAACCCTGCAACACCACCAAAACCAAACAACAAAACCAACCAAAAACTGTTCTCAACTTTAACTTCATTAATAGCAACAAGTCACCGATCAAAAAGGTTAAACAAAACAGTGACAAACCAAAGAGTTTTGATGAGGTCACCGGCGCCGCCTTTCTTTCCCGGAATTCACCTAGAGCTAGCAAGGATTTCACTTCCTACGGTGGTGCCGCCACCGCTGGAGAATCTGATGCTGGTGATAAGATAGGACTCCCTTTACCGCGACCTTCTGTTTCTTCTAGCTTTAGCAATGAACAAGGGCTTGTTTTTGGATCCGGTTCATTCTCTGGTGGTTCTAGTGTTAGTTCCAATGGCTCCATTGATGATCACTCTATATCTCCAATTAACGCCACAAGAGGGAAAGTTGACATGAAGTTCAATGTGAGGTCGAAAAGCCCAGGTCCTGGGTCAAGAGGGCCCACCAGCCCTACTTCACCTCTTCATCCAAAGTTGAATGCTCTGAATCTCGAGTCCTCTACGGGCAAGCAAGAAGATGTAAGGAGTCAATCTCATCCATTGCCTCTTCCTCCAAGTTCTCCTACAAGTCCGTCTTCTCTATCAAACACACGAGCAAATGGACAGCTAGAGAACAATATCAGTAACCGGGGCAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACCTTTGGACATGTTTACCAAGGATTCCATAGTGAAAGTGGACAAATGTGTGCGATAAAAGAAGTCAGGGCTGTCTGTGATGACCAATCCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATACATTTGCTTAGCCAGCTATCACATCCAAACATTGTTCAATACTATGGGAGTGACTTGGGAGAAGAATCACTTTCAGTTTATTTGGAATTTGTATCGGGTGGTTCTATTCACAAACTACTTAAGGAATATGGATCCTTCGGGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTCTCCTATCTTCATGGAAGAAATACAGTACATAGGGATATCAAAGGGGCAAACATACTAGTTGATCCTAATGGTGAAATTAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTACGTCAGTGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTTATGAATACACACGGGTATAGGCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACGTCGAATCCCCCTTGGAGTCAGTATGAAGGGGTAGCTGCGATATTTAAAATTGGTAACAGCAAAGATATGCCCGAAATTCCTGAGCATCTCTCAAACGATGCGAAGAATTTCATTAAGCTATGCTTACAAAGAGATCCATCAGCTCGTCCAACTGCTCAAATGCTACTAGACCACCCCTTTATCCGAGACCAGTCAGCAACAAAATCTGTAAATGTTAGCTTAACGAGAGATGCTTTCCCTTACATGTTTGATGGAAGCCAGACGCCGCCAGTTCTAGAGCATCATTCCAATTCCAATAGAACAAATAATAATTTAACCAACGGAGACTATGCAACAAAGAAAGTTATTGGATCTTCACGAGCCGTAAGGAGCCCAAGAGATAACACAAGAATGATCACATCTTTACCAGTGTCTCCCTGCTCAAGCCCATTGCGACAATATGGATCATCAAACACGAGCTGTTTCCTTTCTCCCCATCCTTCATACACAATGATGGGACAAAATAACCTCAATTCGTATCCATTAAGATCGAATGCCGCATTCACCCTTGATTCTTGGCAGGAAAAATCTCTATACGGAGCTCACACTCCACCTGGTGGATCCCCAAGAACGAGACTCATATGA 1881 0.4338 MPTWWSKKPCNTTKTKQQNQPKTVLNFNFINSNKSPIKKVKQNSDKPKSFDEVTGAAFLSRNSPRASKDFTSYGGAATAGESDAGDKIGLPLPRPSVSSSFSNEQGLVFGSGSFSGGSSVSSNGSIDDHSISPINATRGKVDMKFNVRSKSPGPGSRGPTSPTSPLHPKLNALNLESSTGKQEDVRSQSHPLPLPPSSPTSPSSLSNTRANGQLENNISNRGKWKKGKLLGRGTFGHVYQGFHSESGQMCAIKEVRAVCDDQSSKECLKQLNQEIHLLSQLSHPNIVQYYGSDLGEESLSVYLEFVSGGSIHKLLKEYGSFGEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSVLSFKGSPYWMAPEVVMNTHGYRLPVDIWSLGCTILEMATSNPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPSARPTAQMLLDHPFIRDQSATKSVNVSLTRDAFPYMFDGSQTPPVLEHHSNSNRTNNNLTNGDYATKKVIGSSRAVRSPRDNTRMITSLPVSPCSSPLRQYGSSNTSCFLSPHPSYTMMGQNNLNSYPLRSNAAFTLDSWQEKSLYGAHTPPGGSPRTRLI 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0739 626 PANTHER MAP KINASE KINASE KINASE 1 607 - -
Lal17g0739 626 Gene3D Transferase(Phosphotransferase) domain 1 221 506 - -
Lal17g0739 626 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 607 - -
Lal17g0739 626 MobiDBLite consensus disorder prediction 64 221 - -
Lal17g0739 626 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Lal17g0739 626 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0739 626 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0739 626 MobiDBLite consensus disorder prediction 509 529 - -
Lal17g0739 626 MobiDBLite consensus disorder prediction 153 186 - -
Lal17g0739 626 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0739 626 SUPERFAMILY Protein kinase-like (PK-like) 222 481 IPR011009 -
Lal17g0739 626 MobiDBLite consensus disorder prediction 508 529 - -
Lal17g0739 626 MobiDBLite consensus disorder prediction 1 21 - -
Lal17g0739 626 CDD STKc_MEKK1_plant 223 480 - -
Lal17g0739 626 MobiDBLite consensus disorder prediction 201 220 - -
Lal17g0739 626 MobiDBLite consensus disorder prediction 95 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0739 Lal-Chr17 5268767 5274525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0739 1 545 MAP Kinase Kinase Kinase AT1G53570 56.115 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal17g0739 Pkinase 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0739 K04421 - gmx:100813122 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0739 17 5268767 5274525 Lal17g0739 17 5268767 5274525 ECH
Lal17g0739 17 5268767 5274525 Lal21g0664 21 5135985 5142060 LSH
Lal17g0739 17 5268767 5274525 Lal4g0627 4 4667493 4673371 LSH
Lal15g1393 15 16104818 16110124 Lal17g0739 17 5268767 5274525 PCT