Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0738 ATGAATATGATTCCAGGTTTTCGATTTCACCCGACTGATGTTGAGCTGGTTAAGTATTTTCTCAAGAGGAAGCTCTTAGGGAAGAAATTTCCTTTCGATGTTATTGCTGAAGTTGAGATTTACAAGTATGCTCCTTGGGATCTCCCAGATAAATCGTTGCTTAAGACTGGGGATATAGAGTGGTACTTCTTTTGTTCTCGAGGGAAGAAATATGCAAGTGGAGCAAGGATGAATCGAGCAACAGAAGTTGGGTACTGGAAGACTACTGGGAAGGATAGATTGATTGAACATAGAAATGAAGTTGTGGGGATGATTAAAACTTTGATATTTCACACGGGTAGAGCACCTAAGGGAAACCGAACTGATTGGGTTATGCATGAATTCAGACTTGAAGACAAGGAGCTTGCTGACAAGGGAATTCCTCAGGACTCCTATGTAATTTGTAAGGTATTTCAAAAGGAAGGCCCTGGTCCCAGGAATGGTGCACAATATGGAAGGCCGTTTAATGAAGAAGACTGGGATGAAGAAGCAGAAATTGGTTGTGTAGTATCTCTCCCTGTTGCAGCTCTGTCTACTCCAGCTCCCATTCAGCTTAACACAGGTCATAGTTCCGCTGCAAATGACATGCATCCTTCTACAAGTGAATGCATTGGGTTGACCTCTGTGTCATGTCTATCTGAATTGACGCCTTCTTGCTTGACACTTCCTTCAGCTCCTCCTAGTAATAATAATGAAGCTGTAGATGCCATTTTATTAATGCTTGATTGTGTCAAAGAAGATAACACACTGGCTCTGAATGAGAACAACAAAATTGAGGCTAATATTGCTGATGGCACACCGTATTTTGATCCGAATGAGATATTTGAGGGTTTAGGAGACCTTGACTACAACTTGGCTGGATTTGGTCATGGACATGATTTTTCCTATAACACCAATGAAATGCTTTCTACATGTGATATCTTGGAGTTTGGTGAATCTCCAGGCTTCTTGGAGTTGATTGACTTAGAGGCGCCACTGTTCTCGCAGACTAAAACATGA 1038 0.4162 MNMIPGFRFHPTDVELVKYFLKRKLLGKKFPFDVIAEVEIYKYAPWDLPDKSLLKTGDIEWYFFCSRGKKYASGARMNRATEVGYWKTTGKDRLIEHRNEVVGMIKTLIFHTGRAPKGNRTDWVMHEFRLEDKELADKGIPQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWDEEAEIGCVVSLPVAALSTPAPIQLNTGHSSAANDMHPSTSECIGLTSVSCLSELTPSCLTLPSAPPSNNNEAVDAILLMLDCVKEDNTLALNENNKIEANIADGTPYFDPNEIFEGLGDLDYNLAGFGHGHDFSYNTNEMLSTCDILEFGESPGFLELIDLEAPLFSQTKT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0738 345 Gene3D NAC domain 12 155 IPR036093 GO:0003677|GO:0006355
Lal17g0738 345 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Lal17g0738 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 245 322 - -
Lal17g0738 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 234 - -
Lal17g0738 345 Pfam No apical meristem (NAM) protein 5 130 IPR003441 GO:0003677|GO:0006355
Lal17g0738 345 PANTHER PLANT NAC DOMAIN PROTEIN 245 322 - -
Lal17g0738 345 PANTHER PLANT NAC DOMAIN PROTEIN 3 234 - -
Lal17g0738 345 SUPERFAMILY NAC domain 2 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0738 Lal-Chr17 5254474 5259475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0738 3 343 NAC Transcription Factor Family AT5G09330 43.956 3.30e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal17g0738 NAM 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0738 - - adu:107470479 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0738 17 5254474 5259475 Lal17g0738 17 5254474 5259475 ECH
Lal17g0738 17 5254474 5259475 Lal21g0662 21 5101151 5105120 LSH