Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0736 ATGGAGAAAATGAATGGAGTTAACAACGTTAAAGAGTCTCAAAGCAAAGCAAGACTTGCAATATTTGAAATAGCACACATGATTAGTGTTCCAATGTCCCTCACTGCTGTTATTAAACTTAAGGTTCCTGATGCCATATGGCAAAATGGTTTAAACATTCCACTCTCTGCCTCACAAATTCTCACGCGCCTCCGTCCTCATGGCGGCGGCGACGCCGAGAATCTCCAGCGTATCCTCCGCTTGCTGGTTTGCTATGACATCTTCAATGAGCACTTGAGCAGTTGTGGTGAAAGGAAATACTCACTCGCCTATGTTGGCAAGTCTCTAGTTGCTGATGAGGAAGGTTTATCATATGCAGCTTATATCCTCCACCATCATCAGGATGCATTGATGCGAGCTTGGCCATTGGTTGGGAACGCAGTGGAAGATCCAACAATAGAGGCATTCAAGAAGGCAAATGGAGAGGGAGCAATATCATACTACATGAAGAGGCCAGAGACATTGGATTTGACACATAAGGCTTTGGCTGGGATATCAGTACCCTTAATGAGGGACATACTCGATTCCTATGATGGGTTCCATGGGATTGAGACATTAGTCGACGTTGGTGGAAGTTCTGGCGTAACCCTTCGTATGATCATGCAGAAGTATCCTAATGTCCGAACGGGCATCAACTTTGACCTTCCCGATATGGTAGCTTGTGCGCCAAGCATCCCAGGTGTAATCCACGTTGGTGGTGACGCATTGGAATCTGTTCCCCATGGAGATGCTATCTTCATGAAGTGGGTACTTTTAGCTTGGACAGATGATGAATGTCGTAAAGCCATGCAAAATTGTTATAAGGCACTTCCGGTGGGTGGAAAATTGATTGCTTGTGATCCTGTGTTGCCGGAGCATACTAATGAGAGTCAGAGAACAAAAGCATTGTTAGGGGGTGACATATTCATAATGACAATGTATAGAACTAAGGGGAAGCATAGGACTGAAGAGCAATTTAAAGAACTTGGAATCTCTGCTGGTTTTCCTCATTTTCGTGCTGTTTATGTTGACCCTTACATGCACATACTCGAGTTTCAGAAATGA 1083 0.4441 MEKMNGVNNVKESQSKARLAIFEIAHMISVPMSLTAVIKLKVPDAIWQNGLNIPLSASQILTRLRPHGGGDAENLQRILRLLVCYDIFNEHLSSCGERKYSLAYVGKSLVADEEGLSYAAYILHHHQDALMRAWPLVGNAVEDPTIEAFKKANGEGAISYYMKRPETLDLTHKALAGISVPLMRDILDSYDGFHGIETLVDVGGSSGVTLRMIMQKYPNVRTGINFDLPDMVACAPSIPGVIHVGGDALESVPHGDAIFMKWVLLAWTDDECRKAMQNCYKALPVGGKLIACDPVLPEHTNESQRTKALLGGDIFIMTMYRTKGKHRTEEQFKELGISAGFPHFRAVYVDPYMHILEFQK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0736 360 SUPERFAMILY "Winged helix" DNA-binding domain 14 112 IPR036390 -
Lal17g0736 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Lal17g0736 360 PANTHER O-METHYLTRANSFERASE 9 359 IPR016461 GO:0008168
Lal17g0736 360 PANTHER OS02G0823400 PROTEIN 9 359 - -
Lal17g0736 360 Pfam O-methyltransferase domain 138 341 IPR001077 GO:0008171
Lal17g0736 360 Gene3D Vaccinia Virus protein VP39 110 360 IPR029063 -
Lal17g0736 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Lal17g0736 360 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Lal17g0736 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Lal17g0736 360 Gene3D - 2 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0736 Lal-Chr17 5228738 5232351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0736 8 360 Monolignol Biosynthesis Gene Families AT3G53140 63.866 1.02e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0736 - - ccaj:109819366 495.738