Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0709 ATGAAAGGAAACAACCCATATCTGATTGTGTTTATTATACAAGCCATATATGCTGCTATGTTTCTTCTCTCTAAAGCTGCATTTGACCATGGAATGAACAATTTCATCTTCGTCTTTTATAGACAGGCTATAGCATCCCTTTTTCTTCTCCCTTTTGCTTTCTTCTTTGAATGGAAAACTGCACCACCGTTGTCATTTCTGACTTTTTGCAAGATTTTCTTCCTTTCTTTCTTTGGTGTTACTTTGAGCTTGGACATATATGGTATTGGTCTTATTTATACCTCTGCTACATTGGCTGCTGCTGCTACTAACTCACTTCCCGTTATTACCTTCATCTTGGCCCTCATACTCAGAATTGAATATTTGAAAATAACAACTTCTGCTGGGATTGCAAAGTTGGTAGGTATTGTGATATGTGTGGCTGGTGTAGCAACCCTTGCCCTTTACAAAGGTCCTCGTTTGGAATTTTTAAGCCATCATCATATTTTGTCATCATACCATGAAACCAAACAACTTCATGGTCATGAATCATCTGTTACATGGATAAAGGGTTGTTTCCTATTACTCTTATCTAACAGCTTTTTTGGGCTTTGGCTTGTTCTTCAGTCTTTTGTTATAAAAGTTTTCCCTTCAAAGCTGCTATTCACAACTCTTCAGTGCTTTTTAAGCTCTATTCAGTCTTTTGTCATTGCAATTGCTGTTGAAAGGGACATAGAGCAATGGAAGTTGGCTTGGAATATCAGACTTCTTTCTGTCTTATATTGTGGCATTATGGTAACGGGTGTAACATATTACTTACAAACATGGGTTATAGAGAAGAAAGGACCTGTGTTTTTAGCCATGTCAACGCCACTGGCTTTGATTCTCACAATCTTCTCCTCTGCACTTGTCTTGGGCGTGATAATAAGATTGGGAAGGTGGGATTGCATTGATTTTAGGACTATACTGCGTGCTGTGGGGAAAGAGCAGAGAACAAATACCCAAAGTCCCGTTAAACTTAGAGCATGCATCAGTGTAGAGAGAGATCGCAATTCTTATATCTGA 1044 0.3851 MKGNNPYLIVFIIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIASLFLLPFAFFFEWKTAPPLSFLTFCKIFFLSFFGVTLSLDIYGIGLIYTSATLAAAATNSLPVITFILALILRIEYLKITTSAGIAKLVGIVICVAGVATLALYKGPRLEFLSHHHILSSYHETKQLHGHESSVTWIKGCFLLLLSNSFFGLWLVLQSFVIKVFPSKLLFTTLQCFLSSIQSFVIAIAVERDIEQWKLAWNIRLLSVLYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALILTIFSSALVLGVIIRLGRWDCIDFRTILRAVGKEQRTNTQSPVKLRACISVERDRNSYI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0709 347 PANTHER WAT1-RELATED PROTEIN 5 306 IPR030184 GO:0016021|GO:0022857
Lal17g0709 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 151 - -
Lal17g0709 347 PANTHER WAT1-RELATED PROTEIN 5 306 - -
Lal17g0709 347 Pfam EamA-like transporter family 183 307 IPR000620 GO:0016020|GO:0016021
Lal17g0709 347 Pfam EamA-like transporter family 7 145 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0709 Lal-Chr17 5016503 5019614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0709 1 255 Nodulin-like Gene Family AT5G64700 62.016 7.36e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0709 - - gmx:100804562 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0709 17 5016503 5019614 Lal17g0709 17 5016503 5019614 ECH
Lal17g0709 17 5016503 5019614 Lal21g0651 21 4987840 4991882 LSH
Lal17g0709 17 5016503 5019614 Lal4g0612 4 4498253 4502634 LSH