Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0708 ATGAGACCCTATCTCTCAAAACATTCTATAATTTTCTCTTCTTCTCTCTCACAATCTCGTGCACATGTTCTTCAACTGTTCCATTTCTCATCATCATCATCATCTCCATCTTCATCTTCATATCAGTATTCTCGGCGCCACGATGATGAGTCTCGAAACGTGAGGGTTTCGGTGTGGTGGGATTTCGAGAACTGCAACTTACCTACCGGAGTTAACCTTTGCAAGATAGCACCGGCGATAACTGACGCCGTTAGAACGAAAGGGATAAAGGGACCACTTCAGATAACCGCTTTCGGCGATGTTCTTCAGCTCTCAAAAGCTAACCAGGAAGCTCTTGCTTACACTGGCATTCAACTCACTCACATTCCCAAAGGTGGAAAGAACAGTGCTGATAGATCTCTTCTTGTTGAACTTATGCATTGGGTTTCCCAAAATCCTCCACCCGCACATCTCTTTCTGATTTCTGGTGATAAGGACTTTGCTGGTTTATTGCACCGGCTAAGAATGAATAACTACAATATCTTGCTTGCAACAATAGGAAAGGCTCCTGATGTGCTCTGCAGTGCGGCAACAATAGCGTGGCAGTGGTCTTCATTGATTAAGGGAGAAGATCTTGCTGGGAAACATTTCAACCATCCTCCTGATGGTCCATTTGGTTCTTGGTATGGAAACTATAAGATGCCTCTTGAAAATCCCTTCTCAGCTGTTGAGCAGTCTACATCTTCACCAACTGTGGAGATCTATGAACCTACGTCAGAGTCGAAGCCAGGTGTAATTCCAAAGTCAGTTTTTAGGCAGGTTAGACATATATTGAGCTTGCATCCAAAAGGAATCTCCATTTCTGATCTTCGTGCAGAGTTGGCAAAATGTAATGTGTGTGTGGATAAACCCTTGTATGGACATAAAACGTTTTCTCGCTTTCTTTTATCAATTCCAAACGTACAGCTCCGGTCTTTAGGGGATGGTAATTTTTTTGTACGTTTGATCCACCCAGGATCCCTTGAACCCGCTGAAAGCACTATTTTGCCACCAACAACTTCTGCTGTTAAGGGTGAGGAAAAGGGCTGTGTAGCAACTCTAAAGTCAAATGGTGTGGTTAACGATATTTCTAGAGATGCAGATGAGACACGCTCAATATCCTCATTGGATGAAAGGATTATGGATGATGATTCAAAATCATTCCAACAGGTCCCTTCACCAGACACGTCCAGTGGGGAATATGTGGATGGTAAAGCGTCATATTCTCCATCGATTGAAACAAATGTGGGTCAACCCCCAAAGAAGATGCAGAAGTCTTCACTGGATAGTGAAAAGGTTGTGGGTGTGGCTGATGCACAATTGTCCAAGATTAAACCATCTCCCAAGAACAATGAACTTCCCAAGACTAAGACAGGTTCCTTGAAAACGAGTTTGAGACAATCACATGTTAATGACTTTGTTAGGCCCGAGCTTGTAACTCAGAAAATTCCGGAAAAGTATACAACTGTAGAGAATTTCGCTGATGGGAATTATAATACAACAGTGGAAACCAATCGTATAGTGAATGATGAATCTGAAAAATTTAAAGCTGAGGATAAACATGAGAAGCCAGCTAGAAAGGAGGAGGATGAAGTTTGTCGCAGCCCATATTCTTTGCCTGTTGATGACTCCGTGGCTGACAAAAGTCCTGGTGAAAGTGCTGAAACTTATAACAAAAGTCCAACTTTCTTTGGTTGGATCAGAAGTTGGTGGCCATTTTCGAAAAGTCGTTCTAAGTCTGATGATTTGACTTGCTGTCAGGACAAGATAGTTAGTCATTCTGAGGAGCTAAAATTGTCTGAACTGGACAAGACTGTTAGTCGATCTGAAGAGCTCAAGTTATCTGAACTGGACCAGACTGTTAGTCAGTCCGAGGAGCCCAATTTATCTGAACAAGACGAGACTGTTAGTCACTCTAAAGAGTCCACATTATCTGTTAATCATTCTGAAGAACCCAGATTATTGAAACTGGACCAGACTCTTGGTCATTCTGAAGAGCCCAAGTTCTCAAAACTGAACCAGAATGTTAGTCATTCAGAAAAGCCTGTGTTATTTTCTAGTAAATCCTTTTGGGATGTCATGGAATCTTTTGTTTTCAGCCCCAAAGGATCACTTATTTTCTCCCAGTCAAGAAGCAGGGAGGATATGGCACATAAATTGCAGAAGGGTGGACCCATGTTTCTTAGATCACTCACTGAAGAAGGTATCCTTAAGCTGGTGGATTTGTTAATGACAGAGAAAAAATGGTTGGAGGAAAGGCCCTCTCAATCTTTTCCTTTTAAGCTAACTCAACCAGTTCAGAGGGGCTCGCCGACAGGCCTATCTCATGGTGCAAATGGCTTGAGATCTCTCTTTCTAAATAGAACACCACAGCACAGCTTGCAAAAAACATCCGAACATGATGCGGAGAAACAGAATCAGAGTGCTCCTCATACTGGAGTTTCCAAACCTGCCACTGAAAAGAAATATAAGGAGAGGTCTAGAGATGATATATTAGCAGACTGTCAGAAACTTGTGAAAGATGTTTTGAGAGAACATCCAGAGGGATATAATATTGGTTGTTTCCGAAAACTATTTGTTCAGAGGTATGGCTATCATCTAGATGTTCAGAAGCTTGGTTATAAAAAATTGGCATCCTTATTACAGATAATGCCTGGGGCTAAATTAGAGTCCACTTTTATTTTTCCTTCTGCTCCTGCTGTTCTTGATTCTGATGGAGAAGCTCCCATCCTCAAAACTGCAGTAACCGATGCCATTCATGTAGTCTCCAACTCAGATTCTGAATTGTCTGATCCAGCCCCGAAAGATGAAAACATTGACTCTCCATGGGAGGAATTGGGTCCTGCCATCAACAACTCCAACCATAGTGATCTGGAATCAAAATTAAGTCCGAAAGTTGAAGAATTGTATATACCAAAGCATCCCAATTATGAACCGATAGTCTCAGATGATGATTCTTCTGAATCTGAAGGAGATAGCCCTTTTTTAACTCAACCTGAAGAGCAAGCAAAGCTAAAACGCAATGAAAACGATAGTTCTCTTTTGCATTTTCTGGATTTGTATGAAAGGAAGGAAGCAGAGAAGTTGGACAGTGTTGAACATTTGGGCAATGCTTTGGCTGATCTTTTAGATAAATCGACTGAATCAACTCGGGGTACCTTTTCCAAAATTTCATCTGGGAATTTCAAGGAGAAGCATAGATCTCAAAAGAGCTATTCATTTGTCGCTGACCCAGTTTTACCTAATAATAAGGACAAGCTAATTGATGGAATATTAGATGGCTGTAAAGAGTCAAATATGCAAAACTAA 3327 0.4139 MRPYLSKHSIIFSSSLSQSRAHVLQLFHFSSSSSSPSSSSYQYSRRHDDESRNVRVSVWWDFENCNLPTGVNLCKIAPAITDAVRTKGIKGPLQITAFGDVLQLSKANQEALAYTGIQLTHIPKGGKNSADRSLLVELMHWVSQNPPPAHLFLISGDKDFAGLLHRLRMNNYNILLATIGKAPDVLCSAATIAWQWSSLIKGEDLAGKHFNHPPDGPFGSWYGNYKMPLENPFSAVEQSTSSPTVEIYEPTSESKPGVIPKSVFRQVRHILSLHPKGISISDLRAELAKCNVCVDKPLYGHKTFSRFLLSIPNVQLRSLGDGNFFVRLIHPGSLEPAESTILPPTTSAVKGEEKGCVATLKSNGVVNDISRDADETRSISSLDERIMDDDSKSFQQVPSPDTSSGEYVDGKASYSPSIETNVGQPPKKMQKSSLDSEKVVGVADAQLSKIKPSPKNNELPKTKTGSLKTSLRQSHVNDFVRPELVTQKIPEKYTTVENFADGNYNTTVETNRIVNDESEKFKAEDKHEKPARKEEDEVCRSPYSLPVDDSVADKSPGESAETYNKSPTFFGWIRSWWPFSKSRSKSDDLTCCQDKIVSHSEELKLSELDKTVSRSEELKLSELDQTVSQSEEPNLSEQDETVSHSKESTLSVNHSEEPRLLKLDQTLGHSEEPKFSKLNQNVSHSEKPVLFSSKSFWDVMESFVFSPKGSLIFSQSRSREDMAHKLQKGGPMFLRSLTEEGILKLVDLLMTEKKWLEERPSQSFPFKLTQPVQRGSPTGLSHGANGLRSLFLNRTPQHSLQKTSEHDAEKQNQSAPHTGVSKPATEKKYKERSRDDILADCQKLVKDVLREHPEGYNIGCFRKLFVQRYGYHLDVQKLGYKKLASLLQIMPGAKLESTFIFPSAPAVLDSDGEAPILKTAVTDAIHVVSNSDSELSDPAPKDENIDSPWEELGPAINNSNHSDLESKLSPKVEELYIPKHPNYEPIVSDDDSSESEGDSPFLTQPEEQAKLKRNENDSSLLHFLDLYERKEAEKLDSVEHLGNALADLLDKSTESTRGTFSKISSGNFKEKHRSQKSYSFVADPVLPNNKDKLIDGILDGCKESNMQN 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0708 1108 MobiDBLite consensus disorder prediction 373 391 - -
Lal17g0708 1108 ProSiteProfiles OST-type HTH domain profile. 259 330 IPR025605 -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 515 542 - -
Lal17g0708 1108 Pfam NYN domain 55 190 IPR021139 GO:0004540
Lal17g0708 1108 PANTHER LIMKAIN B LKAP 10 1047 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lal17g0708 1108 MobiDBLite consensus disorder prediction 373 470 - -
Lal17g0708 1108 Pfam OST-HTH/LOTUS domain 838 891 IPR025605 -
Lal17g0708 1108 Pfam OST-HTH/LOTUS domain 263 323 IPR025605 -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 392 430 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 622 636 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 798 832 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 450 470 - -
Lal17g0708 1108 CDD PIN_limkain_b1_N_like 55 178 - -
Lal17g0708 1108 Gene3D - 47 195 - -
Lal17g0708 1108 PANTHER EMB|CAB71880.1 10 1047 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 621 655 - -
Lal17g0708 1108 CDD LOTUS 838 892 - -
Lal17g0708 1108 ProSiteProfiles OST-type HTH domain profile. 837 911 IPR025605 -
Lal17g0708 1108 CDD LOTUS 260 314 - -
Lal17g0708 1108 Gene3D - 832 898 IPR041966 -
Lal17g0708 1108 Gene3D - 260 331 IPR041966 -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 930 965 - -
Lal17g0708 1108 Pfam OST-HTH Associated domain 712 766 IPR025677 -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 515 565 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 981 1005 - -
Lal17g0708 1108 MobiDBLite consensus disorder prediction 637 655 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0708 54 202 C2H2 Transcription Factor Family AT5G61190 42.953 2.19e-34 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0708 - - lang:109328441 2016.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0708 17 5005168 5012160 Lal17g0708 17 5005168 5012160 ECH