Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal17g0707 | ATGGATTCCAACGATTTCCGTTCAATATTGGATTCTTCGGGCGTCGACGTGTGGTCGTTCATCGACACCGCAATCGCCGTCGCCGCGACGGATTCCGGCGATGAGCTGAAGCGCCGGAGAGACGCTATCGTCGAGAGGCTCTACTCCGCCACCACTGCTCCTCCGCGGTGCCGGAATTGCGACGGAGGCAACCGTAGTGTCGTCACTACCAACAGCGACCGAGTTAGGAAACAACAGAGGACCCGTAGCCCTAGCCCTAAACGACAATCACCACAACGCGAGCAACGACGTCGTTTCGCCTCTTCCCCCGAAACGCCACAGTCTCTTGAAAACGACAACGATGACGAAGAAAACGACACTGATTTGGATCCTTACGGTGGCTTGTTCGATGATGAACAGAAGAAGATTCTGGAAATTAAGGAGCAGCTGGAAGAACCTGATCAGTCTGAAGATTCATTGGTGGATTTGCTTCAAAATCTCGTGGATATGGATATTACATTCCAAGCTCTGAAGGAAACTGACATTGGTAGGTACGTGAATCGGTTGAGGAAGCATTCGTCTAATGACATTCGCAGATTGGTGAAGCTACTTGTCAGGAAGTGGAAGGAAACTGTAGATGAGTGGGTGAAGTCAAATCCACAGGGAGAAGCTGCTACTCTTATGGCTGATGGAGACTCTTCCCCTCTTCAGAAAACCACCCAAAATGGGCATCATCATATTCCTGATTTTGCTTACTCACCGAATCCACACAATGGGAGTTCTGGGTCTGACCGTAATGAAGCAGAGCTGAAACCAAAACCGAAAGTGATTCCTTCTCGCAGAGAAGCACCACCTCCAAGACCAATTCCACCACCTTTACTTCATACCCCTGCTCCTTCTGCCCTTCAAAACAAACAGAAAAAACTGGAAGAAAGCAATTTTGATGCGGAGAAACTTGCTTCTGCAAGAAAAAGGCTTCAAGCGAACTATAAAGAAGCTGAAAATGCCAAAAAGCAAAGGACAATTCAGGTTATGGACATTCATGAGTTACCAAAGTCAAAATCCAAGAATACCTTCTTTGGAAAGAACAAAGGCAGTGGCGGTTCTCATGGGAGGCACTGGTGA | 1104 | 0.4801 | MDSNDFRSILDSSGVDVWSFIDTAIAVAATDSGDELKRRRDAIVERLYSATTAPPRCRNCDGGNRSVVTTNSDRVRKQQRTRSPSPKRQSPQREQRRRFASSPETPQSLENDNDDEENDTDLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVDLLQNLVDMDITFQALKETDIGRYVNRLRKHSSNDIRRLVKLLVRKWKETVDEWVKSNPQGEAATLMADGDSSPLQKTTQNGHHHIPDFAYSPNPHNGSSGSDRNEAELKPKPKVIPSRREAPPPRPIPPPLLHTPAPSALQNKQKKLEESNFDAEKLASARKRLQANYKEAENAKKQRTIQVMDIHELPKSKSKNTFFGKNKGSGGSHGRHW | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 257 | 273 | - | - | |
Lal17g0707 | 367 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 134 | 215 | IPR035441 | - | |
Lal17g0707 | 367 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 1 | 367 | IPR044790 | - | |
Lal17g0707 | 367 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 130 | 218 | IPR035441 | - | |
Lal17g0707 | 367 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 1 | 367 | - | - | |
Lal17g0707 | 367 | ProSiteProfiles | TFIIS N-terminal domain profile. | 131 | 208 | IPR017923 | - | |
Lal17g0707 | 367 | Coils | Coil | 309 | 336 | - | - | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 340 | 367 | - | - | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 109 | 126 | - | - | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 274 | 290 | - | - | |
Lal17g0707 | 367 | CDD | TFIIS_I | 133 | 206 | - | - | |
Lal17g0707 | 367 | Pfam | TFIIS helical bundle-like domain | 156 | 204 | IPR017923 | - | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 216 | 306 | - | - | |
Lal17g0707 | 367 | SMART | TFS2_5 | 136 | 207 | IPR003617 | GO:0005634 | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 225 | 239 | - | - | |
Lal17g0707 | 367 | MobiDBLite | consensus disorder prediction | 53 | 128 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal17g0707 | Lal-Chr17 | 4996202 | 5000646 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Lal17g0707 | Med26 | 1.4e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal17g0707 | - | - | aip:107622503 | 479.944 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal17g0707 | 17 | 4996202 | 5000646 | Lal17g0707 | 17 | 4996202 | 5000646 | ECH | |
Lal17g0707 | 17 | 4996202 | 5000646 | Lal21g0650 | 21 | 4970222 | 4973481 | LSH | |
Lal17g0707 | 17 | 4996202 | 5000646 | Lal4g0610 | 4 | 4473640 | 4476967 | LSH | |
Lal7g0801 | 7 | 14792722 | 14794642 | Lal17g0707 | 17 | 4996202 | 5000646 | PCT | |
Lal19g0926 | 19 | 13274483 | 13276975 | Lal17g0707 | 17 | 4996202 | 5000646 | PCT | |
Lal17g0707 | 17 | 4996202 | 5000646 | Lal7g0801 | 7 | 14792722 | 14794642 | PCT | |
Lal17g0707 | 17 | 4996202 | 5000646 | Lal19g0926 | 19 | 13274483 | 13276975 | PCT |