Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0698 ATGTCCACAACGTCTCTTAACCACAGCTTTTTTGAAGAACAAGATCAGATCCCTACAAAGATGGGGTTCTTTCCTTTCCCAACAAACCTAACCCTTCCTCCTTTGAGAGCCTTCAGTGCCATAGCTTCTAGTGAAAATTTTGCAGGAAACCTACCCGCAACTATTAGTGTTAAAAAACCACGACCAGATCTCAGTTCTAGTTTAGGACGAGAAAGCCAACTCCTTTCCTTGAATAGATCGAGTCATGTAAATTCCTGGGCATGGGGAGAAGTAGCAGATTGCATGATGGGTAAGAGTAGTGGAGGGGATGAACATCATCATCATCAACATCTAGGGGTTTCAGCCATTAAGATGAAGAAAATGAAGAATAGGAGGAAAGTGAGGGAACCCAGGTTTTGCTTCAAGACCTTGAGCGAAGTGGATGTGTTGGATGATGGATACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTAAAGAAACGTGTGGAGCGCTTAGCTGAGGATCCAAGAATGGTGATAACCACATATGAAGGGAGACATGCACACTCTCCATCAAATGAACTTGAAGACTCACAATCTCCATCACAACTTACCAATTTCTTTTGGTAG 663 0.4344 MSTTSLNHSFFEEQDQIPTKMGFFPFPTNLTLPPLRAFSAIASSENFAGNLPATISVKKPRPDLSSSLGRESQLLSLNRSSHVNSWAWGEVADCMMGKSSGGDEHHHHQHLGVSAIKMKKMKNRRKVREPRFCFKTLSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQSPSQLTNFFW 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0698 220 MobiDBLite consensus disorder prediction 205 220 - -
Lal17g0698 220 MobiDBLite consensus disorder prediction 196 220 - -
Lal17g0698 220 ProSiteProfiles WRKY domain profile. 138 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0698 220 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 48 211 - -
Lal17g0698 220 Gene3D WRKY domain 130 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g0698 220 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 211 IPR044810 GO:0003700
Lal17g0698 220 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0698 220 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g0698 220 Pfam WRKY DNA -binding domain 144 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0698 Lal-Chr17 4929304 4933257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0698 34 220 WRKY Transcription Factor Family AT4G39410 52.301 2.59e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal17g0698 WRKY 5.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0698 - - gmx:100799241 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0698 17 4929304 4933257 Lal17g0698 17 4929304 4933257 ECH
Lal17g0698 17 4929304 4933257 Lal4g0602 4 4375826 4383674 LSH