Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0689 ATGGCTCCTACCAAGCAGAGAACCGCTAGGGTTACAAGAAACCCTGAATTGATAAGGGGTATCGGAAAATACTCACGATCCCAAATGTACCATAAGAGAGGTTTATGGGCAATCAAGGCCAAAAACGGCGGCGTTTTGCCCCGTCACGCGCCTAAGGCTAAGCCTGCAGTTCCTGCCGAGAAAGCACCGAAGTTCTACCCTGCTGATGATGTTAAGAAGCCTCTTCTTAACAAGCACAAACCCAAGCCCACCAAGCTAAGGGCTAGCATTACCCCAGGGACAGTGCTGATTCTTCTTGCCGGTCATTTCAAGGGAAAGAGAGTTGTGTTTCTTAAGCAGCTTCCTTCTGGGTTGCTTCTTGTAACTGGTCCATTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGGCCTATGTCATTGGCACATCAACCAAAGTCGATGTTTCTGCTGTTAAAGTGGATAAATTTGACGACAAGTATTTCACTAAGGATACCAAGAAAAAGAACAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGCTCCCTCAGGAGAAGAAAGATGATCAGAAGTCTGTGGATTCTGCTTTGTTGCAAGCCATTCAGAGTGTTCCAGACCTGAAGACTTACCTTGGTGCCAGGTTTTCCCTGAAATCAGGCCAGAAGCCTCACGAGCTTCTCTTTTAG 705 0.4638 MAPTKQRTARVTRNPELIRGIGKYSRSQMYHKRGLWAIKAKNGGVLPRHAPKAKPAVPAEKAPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGHFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSAVKVDKFDDKYFTKDTKKKNKKGEGEFFEAEKEEKNVLPQEKKDDQKSVDSALLQAIQSVPDLKTYLGARFSLKSGQKPHELLF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0689 234 SUPERFAMILY Translation proteins SH3-like domain 88 178 IPR008991 -
Lal17g0689 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Lal17g0689 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lal17g0689 234 CDD KOW_RPL6 82 234 IPR041997 -
Lal17g0689 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lal17g0689 234 Pfam Ribosomal protein L6, N-terminal domain 3 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Lal17g0689 234 Gene3D - 88 172 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0689 Lal-Chr17 4882689 4884836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0689 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.310 1.09e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0689 K02934 - gmx:100784101 335.495