Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0683 ATGGTTGTAGACTTAAGCAGGAATAATTTTTCTGGTGACATTTCTGTTATAATGAACTGGGAAGGCACATTGGAGGCTATTGATCTTAGTTCAAACAGGCTGTCAGGATCCTTGCCTCCTATTTTAGGGACACATTCTAAATTGTCTAGGGTTGACTTAAGTTTAAATGAACTTACTGGATCCATTCCGGGTAGTTTAGTTACTTCATCATCACTCACAAGCCTGAATCTTTCTGGTAATAAATTTACAGGAGCACTTCCACTTCAATGGTCAGGGGCAAGCGAGTTACTACTTATGCCTCCTTATCTTCCATTGGAATACCTTGATGTATCCAGTAACTCCTTAGAAGGTGAGTTGCCTTCTGATATAAGTAAGATGGCTGGGCTTAAACTGCTGAATCTGGCTAGGAATGGCTTTTCCGGAGAGCTGCCGAATGAATTGAACAAACTTATTTATTTAGAGTACCTTGATTTGTCTAACAACCAATTTACTGGGAAAATCCCTGGTAAGCTTTCATCCAACTTAACTGTATTTGATGTGTCCCGTAATGATCTCTCTGGCCGTGTCCCTGAAAATTTGCAGCGGTTCCCTCCTTCTTCATTTCACCCTGGGAATGAAAAGCTAACCTTAAAAGATACGTTTCTTGTAACTTCTTCAGTGCCTGTTAATGAGAAACATCATGGTTCAAGGGGTATTATCAGGATAACAATTATTGTTGCGTCTGTGATAGCTGCTGTGATGATTGTTTTTGTTCTATTGGCCTATCATCGAGCACAAGTTAAAGAATTTCATGGAAGAAGTGAGTTCAATGGTCAAAATGCTGGAAGAGGTGTCAAGTTAGGCAGACTTATAAGGCCTTTGCACTTCAAGTTCAATAAAAATGCTCATCCCCCAAAAACTTCGTCGAGCTTATCAAATGATCATTTGTTGACTTCTAATTCGAGGTCACTCTCTGGGCAGAGAGAATTTATATCTGACATTTCTGATATTGGCTTACTTCATGGAACAGTGGCTACTACTTCAGCATCTGCAACTCCTAATTTGATGGATAACCCTCCCACACCATCTGAAAGGAACTCATTTCATAGCTCCCGGTTGTCATCCTTGCCACATTTTATGGAGGCTGGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCGGATCAGCTGGCTGGAGAGTTGTTCTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAGTTATCTCGTGCTCCAGCTGAAGTTCTTGGCAGAAGTAGTCATGGTACTTTATATAAAGCTACTCTGGGCAGTGGTCATATGTTGACTGTAAAATGGTTGCGAGTGGGATTAGTCAAACATAAAAAAGAGTTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTGCAAGCATACTATTTGGGGCCTAGGGAAGAAGAGAGGCTTCTATTAGCTGACTATATACACGGGGACAGCTTGGCCTTACATCTCTATGAGACCACGCCCCGGCAGTACTCACCATTATCATTCAGCCAGAGATTAAGAGTTGCTGTTGACGTTGCTCGATGTGTTTTATACCTTCATGACCGAGGGCTTCCACATGGGAATCTAAAGCCAACAAATATTTTGCTATCAGGCCCTGATTACAGCGCATGTATTACTGACTATGGCCTGCACCGGCTCATGACACCTGCCGGAATTGCAGAACAGATACGAAATCTAGGAGCACTTGGATACTGCGCCCCAGAACTCGCCACGGCTGCAAAACCAGTTCCATCTTTTAAGGCTGATGTGTATGCACTTGGCGTGATCTTAATGGAAATATTAACGAGAAAGAGTGCAGGCGACATAATATCAGGACAGTTAGGTGCAGTTGATCTTACAGATTGGGTTAGGCGATGTGAGCAACAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCTGGTGGAAAAGAATCGTCCCAAGGAATGAATGAACTGTTTGCAATATCTTTGAGGTGTATTCTTCCTGAAAATGAGAGGCCTAACATCAGACAAGTTTTTGATGATCTGTGTTCTATATTGGTTTGA 2073 0.4216 MVVDLSRNNFSGDISVIMNWEGTLEAIDLSSNRLSGSLPPILGTHSKLSRVDLSLNELTGSIPGSLVTSSSLTSLNLSGNKFTGALPLQWSGASELLLMPPYLPLEYLDVSSNSLEGELPSDISKMAGLKLLNLARNGFSGELPNELNKLIYLEYLDLSNNQFTGKIPGKLSSNLTVFDVSRNDLSGRVPENLQRFPPSSFHPGNEKLTLKDTFLVTSSVPVNEKHHGSRGIIRITIIVASVIAAVMIVFVLLAYHRAQVKEFHGRSEFNGQNAGRGVKLGRLIRPLHFKFNKNAHPPKTSSSLSNDHLLTSNSRSLSGQREFISDISDIGLLHGTVATTSASATPNLMDNPPTPSERNSFHSSRLSSLPHFMEAGEKPVMLDVYSPDQLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLGSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLQAYYLGPREEERLLLADYIHGDSLALHLYETTPRQYSPLSFSQRLRVAVDVARCVLYLHDRGLPHGNLKPTNILLSGPDYSACITDYGLHRLMTPAGIAEQIRNLGALGYCAPELATAAKPVPSFKADVYALGVILMEILTRKSAGDIISGQLGAVDLTDWVRRCEQQGRVMDCIDRDIAGGKESSQGMNELFAISLRCILPENERPNIRQVFDDLCSILV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0683 690 Pfam Leucine Rich Repeat 105 125 IPR001611 GO:0005515
Lal17g0683 690 Pfam Leucine Rich Repeat 153 169 IPR001611 GO:0005515
Lal17g0683 690 SUPERFAMILY Protein kinase-like (PK-like) 413 685 IPR011009 -
Lal17g0683 690 ProSiteProfiles Protein kinase domain profile. 410 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0683 690 Pfam Leucine rich repeat 23 82 IPR001611 GO:0005515
Lal17g0683 690 Gene3D Transferase(Phosphotransferase) domain 1 489 690 - -
Lal17g0683 690 SUPERFAMILY L domain-like 2 196 - -
Lal17g0683 690 PANTHER OS07G0626500 PROTEIN 2 687 - -
Lal17g0683 690 MobiDBLite consensus disorder prediction 343 363 - -
Lal17g0683 690 Gene3D Ribonuclease Inhibitor 1 214 IPR032675 -
Lal17g0683 690 Gene3D Phosphorylase Kinase; domain 1 389 487 - -
Lal17g0683 690 PANTHER OS07G0626500 PROTEIN 2 687 - -
Lal17g0683 690 Pfam Protein kinase domain 414 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0683 Lal-Chr17 4845014 4850857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0683 17 668 Receptor kinase-like Gene Family AT4G31250 28.073 3.75e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal17g0683 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0683 - - gmx:100802768 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0683 17 4845014 4850857 Lal17g0683 17 4845014 4850857 ECH
Lal17g0683 17 4845014 4850857 Lal21g0635 21 4822905 4829819 LSH