Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0674 ATGGGAAAATACCTTAAACCTTCAGAACGCCGAAATCTTAGTTTGAGATCTGCAACAATGACATTCAAGCGCAGAAATGGTGGGCGCAACAAGCATGGTCGTGGCCACGTCAAATTCGTTCGCTGCTCCAACTGCGGTAAATGCTGTCCTAAGGACAAATCCATCAAGAGGTTTGTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTTCAGGAGGCTTGTGTCTATGAACAATACGCACTTCCAAAGCTGTATGTGAAGCTGCAGTACTGTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGGGTTCGTTCTCGCACTGATAGGAGGAAGCGAGACCCTCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCCCGCCCCGCTGGAGTCGCAGCTCCTACTCCTACTCGTGCCTAA 453 0.5099 MGKYLKPSERRNLSLRSATMTFKRRNGGRNKHGRGHVKFVRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVYEQYALPKLYVKLQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVAAPTPTRA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0674 150 Pfam Ribosomal protein S26e 20 125 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal17g0674 150 Gene3D Ribosomal protein S26e 20 133 IPR038551 -
Lal17g0674 150 PANTHER 40S RIBOSOMAL PROTEIN S26 20 146 - -
Lal17g0674 150 MobiDBLite consensus disorder prediction 109 129 - -
Lal17g0674 150 MobiDBLite consensus disorder prediction 106 150 - -
Lal17g0674 150 PANTHER 40S RIBOSOMAL PROTEIN S26 20 146 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal17g0674 150 ProSitePatterns Ribosomal protein S26e signature. 92 99 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0674 Lal-Chr17 4766107 4768190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0674 20 135 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 1.54e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0674 K02976 - gmx:100781822 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0674 17 4766107 4768190 Lal17g0674 17 4766107 4768190 ECH
Lal17g0674 17 4766107 4768190 Lal4g0585 4 4247220 4249915 LSH