Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0660 ATGCTTGCATTTTCAAACATGAGAGCTATTTTTCTCTGCTTGTTATTTTTGGTTTTTGTTCTAGTGGTTTCTGCAAATGCAGTGAACCCGTCTCTGAACGACGACGTTTTGGGGCTTATTGTGTTCAAAGCTGACTTACAAGATCCCAATGGAAAGCTCGCGTCATGGAACGAAGATGACGAGAGTGCGTGTGGTGGTAATTGGGTTGGTGTGAAGTGCAACCCCAGATCCAACAGGGTCACTGAGCTTAATCTTGATGGGTTCTTTCTAAATGGAAAGTTTGGTAGAGGTTTGTTAAGGTTGCAGTTTCTAAGGAAGCTTTCTCTTTCGAGGAATAATCTTACCGGGGGTATTAGCCCCAACATTGCTCGAATTGATAACCTTCGTGTTGTCGATTTGAGTGATAATAATCTTTCCGGGGAAGTTCCTGATGAGTTTTTCAAACAATGTGGGTCCCTCAGGATTGTTTCTCTAGCTAGGAACAAGTTTTCCGGGAAGATTCCACCTAGTTTGGGTTCATGTTCAGCTCTTGCTTCTATTGACCTTTCGTTTAACATGTTTTCGGGTTCTGTTCCTTCGGGGATTTGGAAATCGAGTGGACTCAGGTCTCTGGATTTGTCTGGTAACTTGTTGGAGGGTGAGATTCCAAAAGGGGTTGATGCAATGAAGAATTTGAGAAGCATTAGTTTAGCAATGAATCAGTTTTTCGGAGAAGTTCCAGCTGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATTTCAGTGATAATTCTCTTTCTGGTAGCATACCTGGGGATTTGAAGGAACTCACATTGTGTAGTTACCTCAGTTTGAGTGGAAATTCTTTCTCAGGAGAGATTCCTGAGTGGATTGGAGAAATGGAAGGTCTTCAGACATTGGACTTATCCCGGAATGGATTTTCTGGTCAGGTGCCGGATTCTATAGGAAACCTTCCGTCCTTGAAGATGTTAAACTTTTCTGCAAATGATCTCACTGGTAATCTGCCAGAGTCGATGGCAAATTTGACAAACCTTTTGGCATTGGATGTCAGCCAGAATTCAATGACCGGAGGTCTTCCGGCATGGATTTTCAAGTCAGACGTGGATAAAGTTTTAGTATCAGAAAGCAGACCGATTGATGGCATGAAAAGTGCTTTCTATTCGTTGGCTGAAGTTGCGATTCAAAGTATTCAAGTTTTGGATTTATCTAACAATGCATTTTCTGGTGAAATCACATCTGCTATTGCAGGTTTAAGCAGCTTGCAGATTTTGAATTTATCAAATAACTCTCTTGGAGGTCCTATACCAGCTGTAATTAGTGAATTAAAAACATTAGATGGCCTTGATTTGAGTTGTAATAACTTAAGCGGACTCATACCTTGGGAAATAGGAGGAGCGATGTCGTTGAAGGAACTGAGATTGGAAAAGAACTCTCTTGTTGGGAAAATTCCATCATCAATTGAGAACTGTTCCGCATTAACCACATTGGTTTTATCCCAGAACAGACTGAGCGGGCCGATACCTGCAGCACTTGCTAAACTTACCAACTTGCAAAATGTGGACTTATCATTGAACAGCCTTACTGGAAACCTGCCTAAGCAATTGGCCAACCTTCCCAACCTTCATTCCTTTAATTTATCTCACAACAACATTCAAGGTGAACTGCCTGGTGGTGGCTTCTTTAATACCATCCCAACTTCGTCTGTTGCTGGCAATCCATCTCTTTGTGGTGCTGCAGTGAACAAATCTTGCCCCGCTGTCCTCCCAAAGCCTATTGTTCTAAATCCCAACACTACTACTGACTCTGGCTCAGGTTCACTGCCTCCAACTTTAGGTCACAAAAGAATCATTCTCAGCATTTCTGCGCTCATTGCTATTGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGGCATCACTGTTCTCAATCTTCGTGTTCGATCCTCTACTGAGAGATCTGCCGCTGCCCTCACATTTTCTGCAGGGGATGATTTCAGCCAATCCCCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCTGAGTTCAGTTCCGGAGCACATGCTTTGCTTAATAAGGATTGTGAACTTGGGCGTGGAGGGTTTGGGGCAGTGTACCAAACGGTTCTTAGAGATGGGCGTTCGGTAGCTATAAAGAAGCTCACTGTATCAAGCCTTGTCAAGTCTCAAGAGGATTTTGAAAGAGAAGTGAAGAAATTAGGAAAAGTCAGACATCAAAATCTTGTGGAACTTGAAGGTTATTATTGGACTCCATCACTGCAGCTCCTCATATATGAGTATGTTTCCGGTGGTAGTCTGTATAAGCATCTCCATGAAGGATCAGGTGGAAACTTTCTCTCATGGAATGAGAGGTTTAATGTTATTCTCGGGACTGCAAAGGCATTGGCTCACTTGCACCAGTCAAACGTTATTCACTACAACATTAAGTCAACCAATATCCTCATTGATAGCTATGGTGAACCTAAAGTAGGGGACTATGGTCTAGCAAGGCTGTTACCAATGCTTGACCGATACGTCTTGAGCAGCAAAATTCAAAGTGCACTGGGCTACATGGCACCGGAGTTTGCCTGCAAAACAGTGAAAATTACTGAGAAATGCGATGTTTATGGGTTCGGAGTTTTGGTTTTGGAGATTGTTACAGGGAAGCGGCCTGTTGAATATATGGAGGATGATGTGGTTGTACTTTGTGACATGGTGAGAGGAACTTTGGAAGAAGGCAGGGTTGAGGAATGTATTGATGAGAAGCTCAAAGGGAAGTTCCCAGCAGAGGAGGCTATTCCGGTAATGAAGCTTGGTTTGATATGCACTTCACAAGTTCCATCTAATAGGCCTGACATGGGAGAGGTAGTTAATATATTGGAGCTCATAAGATGCCCCTCTGAAGGACAAGAAGAGTTGGGATAA 2937 0.4304 MLAFSNMRAIFLCLLFLVFVLVVSANAVNPSLNDDVLGLIVFKADLQDPNGKLASWNEDDESACGGNWVGVKCNPRSNRVTELNLDGFFLNGKFGRGLLRLQFLRKLSLSRNNLTGGISPNIARIDNLRVVDLSDNNLSGEVPDEFFKQCGSLRIVSLARNKFSGKIPPSLGSCSALASIDLSFNMFSGSVPSGIWKSSGLRSLDLSGNLLEGEIPKGVDAMKNLRSISLAMNQFFGEVPAGFGSCLLLRSIDFSDNSLSGSIPGDLKELTLCSYLSLSGNSFSGEIPEWIGEMEGLQTLDLSRNGFSGQVPDSIGNLPSLKMLNFSANDLTGNLPESMANLTNLLALDVSQNSMTGGLPAWIFKSDVDKVLVSESRPIDGMKSAFYSLAEVAIQSIQVLDLSNNAFSGEITSAIAGLSSLQILNLSNNSLGGPIPAVISELKTLDGLDLSCNNLSGLIPWEIGGAMSLKELRLEKNSLVGKIPSSIENCSALTTLVLSQNRLSGPIPAALAKLTNLQNVDLSLNSLTGNLPKQLANLPNLHSFNLSHNNIQGELPGGGFFNTIPTSSVAGNPSLCGAAVNKSCPAVLPKPIVLNPNTTTDSGSGSLPPTLGHKRIILSISALIAIGAAAVIVIGVIGITVLNLRVRSSTERSAAALTFSAGDDFSQSPTTDANSGKLVMFSGEPEFSSGAHALLNKDCELGRGGFGAVYQTVLRDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVELEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHQSNVIHYNIKSTNILIDSYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGTLEEGRVEECIDEKLKGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0660 978 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Lal17g0660 978 ProSiteProfiles Protein kinase domain profile. 695 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0660 978 Gene3D Transferase(Phosphotransferase) domain 1 772 976 - -
Lal17g0660 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 976 - -
Lal17g0660 978 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Lal17g0660 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 7 976 - -
Lal17g0660 978 Pfam Leucine Rich Repeat 420 440 IPR001611 GO:0005515
Lal17g0660 978 Pfam Leucine Rich Repeat 468 490 IPR001611 GO:0005515
Lal17g0660 978 Pfam Protein tyrosine and serine/threonine kinase 697 963 IPR001245 GO:0004672|GO:0006468
Lal17g0660 978 Pfam Leucine rich repeat 296 354 IPR001611 GO:0005515
Lal17g0660 978 Pfam Leucine rich repeat 492 551 IPR001611 GO:0005515
Lal17g0660 978 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Lal17g0660 978 CDD STKc_IRAK 701 967 - -
Lal17g0660 978 Gene3D Ribonuclease Inhibitor 296 587 IPR032675 -
Lal17g0660 978 Gene3D Phosphorylase Kinase; domain 1 686 771 - -
Lal17g0660 978 SMART LRR_typ_2 342 366 IPR003591 -
Lal17g0660 978 SMART LRR_typ_2 538 562 IPR003591 -
Lal17g0660 978 SMART LRR_typ_2 418 442 IPR003591 -
Lal17g0660 978 SMART LRR_typ_2 125 149 IPR003591 -
Lal17g0660 978 SMART LRR_typ_2 222 246 IPR003591 -
Lal17g0660 978 SMART LRR_typ_2 294 318 IPR003591 -
Lal17g0660 978 SUPERFAMILY RNI-like 156 554 - -
Lal17g0660 978 SUPERFAMILY Outer arm dynein light chain 1 79 192 - -
Lal17g0660 978 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Lal17g0660 978 SUPERFAMILY Protein kinase-like (PK-like) 699 962 IPR011009 -
Lal17g0660 978 PRINTS Leucine-rich repeat signature 128 141 - -
Lal17g0660 978 PRINTS Leucine-rich repeat signature 418 431 - -
Lal17g0660 978 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0660 Lal-Chr17 4684224 4688696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0660 10 978 Receptor kinase-like Gene Family AT3G56370 67.897 0.0 1284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lal17g0660 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0660 - - gmx:100791629 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0660 17 4684224 4688696 Lal17g0660 17 4684224 4688696 ECH