Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0657 ATGGCTTCTTCTTCTAATTGGGTCATGGAAAGTGGTGATGTTCCTCATGTTTTGGCAGTTGATGACAACCTTATTGATCGCAAACTTGTTGAAAAGTTGCTTAGGAACACTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCTAGGGCATTGGAGTTCTTGGGCTTAACAAGTGGGGAACAGAACCCCTTGAATGGGAGATCCAAAGTGAATTTGGTTATCACAGATTATTGCATGCCAGGGATGACAGGCTATGAACTACTTAAGAAAATTAAGGAATCATCTGAGATGAAGGAGATTCCAGTGGTTATAATGTCATCTGAGAACATTCCAACAAGGATTAACAAGTGTATGGAAGAAGGAGCTCAAATGTTCATGTTGAAGCCTCTCAAACAATCTGATGTGAAAAAACTAACATGTCAGCTTATGATGAATAGAGATTGTGAAATTTAG 453 0.3907 MASSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNTSCKVTTAENGPRALEFLGLTSGEQNPLNGRSKVNLVITDYCMPGMTGYELLKKIKESSEMKEIPVVIMSSENIPTRINKCMEEGAQMFMLKPLKQSDVKKLTCQLMMNRDCEI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0657 150 Pfam Response regulator receiver domain 17 137 IPR001789 GO:0000160
Lal17g0657 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 5 144 - -
Lal17g0657 150 SUPERFAMILY CheY-like 15 141 IPR011006 -
Lal17g0657 150 ProSiteProfiles Response regulatory domain profile. 16 143 IPR001789 GO:0000160
Lal17g0657 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 144 IPR045279 GO:0009736
Lal17g0657 150 Gene3D - 13 147 - -
Lal17g0657 150 SMART REC_2 15 139 IPR001789 GO:0000160
Lal17g0657 150 CDD REC_typeA_ARR 17 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0657 Lal-Chr17 4661344 4663464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0657 16 146 Response Regulator Gene Family AT3G56380 72.180 1.65e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal17g0657 Response_reg 4.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0657 K14492 - gmx:100499827 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0657 17 4661344 4663464 Lal17g0657 17 4661344 4663464 ECH