Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0655 ATGGAAGATGTTATTAATTCTATTCACCATGCTTGTGCATTAGCTCAAAGCATTGAATCAGACCTACCCAACTTGGCAAACCAGCCTGCTAGGTTATCCTTATCCATTGATGAAATTGTTAAGATATTGAGTGATGCCAAGGAAAGGATAATGTTATTGTTCCAAAATGACCAAACACCATTATCTTCCTTTTCTCAGATGATGATGATTCCTCATGAAATGCATCATCAACCTCAGATGGATGCAATTTCAATGCAGGAATTGCTCAGCTCTAGTTATACACAGACAACGGATCAGTTGCTTCAAGCTGCGATGAGCACAATACCACTTGATGTTAGAACTTTGCCCGAAACTAAGATGATGGGTAAGGAGGCAATAGTAGCATCACACTCACGACCAAGAAAAAGGAAAGTTGATGTTGAGAAGAGAACAAGGATGGTTCCTGCACCACAGTTTGGAAACACAGAGATGCCACCGAAGGATGGATTCACTTGGAGAAAATATGGTCAGAAAGAGATACTTGGCTCCAAGTATCCAAGGTAG 543 0.407 MEDVINSIHHACALAQSIESDLPNLANQPARLSLSIDEIVKILSDAKERIMLLFQNDQTPLSSFSQMMMIPHEMHHQPQMDAISMQELLSSSYTQTTDQLLQAAMSTIPLDVRTLPETKMMGKEAIVASHSRPRKRKVDVEKRTRMVPAPQFGNTEMPPKDGFTWRKYGQKEILGSKYPR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0655 180 Gene3D WRKY domain 135 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g0655 180 PANTHER WRKY TRANSCRIPTION FACTOR 55 2 180 - -
Lal17g0655 180 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 180 IPR044810 GO:0003700
Lal17g0655 180 Pfam WRKY DNA -binding domain 160 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0655 180 ProSiteProfiles WRKY domain profile. 161 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0655 180 SUPERFAMILY WRKY DNA-binding domain 156 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0655 Lal-Chr17 4652293 4655670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0655 1 180 WRKY Transcription Factor Family AT2G40740 38.144 6.71e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal17g0655 WRKY 1.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0655 - - gmx:100786198 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0655 17 4652293 4655670 Lal17g0655 17 4652293 4655670 ECH