Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0654 ATGATGAGTAGTATTCTTTCCCCTCATGAAAGTGTCTTATCCAATAGGAAGAGGGTAATAAGAGAACTTCTTCAGGGTCATGACTGTGCTACTAAGCTTAAGTTTCTGCTTCAAAACCCTAATGCCTCTAATGGGTCTTTCTCAGCTAAAGAACTTTTGGCTAATGTGTTGAGATCTTTCACTCAGACTATTTCTGTGCTCACTGCTTCTTCTTATGATATTGAAGCTTCTGATGAGGTTGTAAATTCTGGAGAAAATGGATCACAAGTGGGTGCTAATTCCAGCAATGATCTCAGGTCTGAGGATTCAAGTGAGGGTAGAAAGAGAACGTTGACCACCACCATAAAGGGTCGAAGAGGTTCATATAAAAGAAGGAGGACTCAACATACATGGACCAAAGTCTCAGAAACCACTAATGATAATCATGCATGGAGAAAGTATGGGCAGAAAGAGATCCTGAATTCTAAATTCCCCAGGAGTTACTTTAGGTGCTCTAAGAAGAATGATCAAGGTTGCCGTGCAACCAAACAGGTGCAACGGGTACAAGAGAATCCAGACATGTACCATACAACGTACATTGGCATACACACATGCAAAGACACCCTCACGGTTCCACAAATGATCACATATTCTGATACTTTGGACTCAATTCTTATGAACTCCAATTCTGACTCAAAGGTACCAAATGAAAAAGACCCTTCTATTATAAAACGAGAATATTACAAACAAGACATGCTCAGTGATCTTAAAGACAACTTGGATTCTACCCTGTGGTCTGATTTGAAGGATTTTGAACAATACAAGTCTGTCATTGTGCCTCCAAAGATGAAATCTCATAATGCAGATACTGTGTATTCATGTAATGATTTTCAAAGCCTGGACATGGATTTTGGGGTATTTTCTTCTCCTTTCAGCACTGACTTCCACTTTGATGAAAGCCATTTGCTTTGA 951 0.3954 MMSSILSPHESVLSNRKRVIRELLQGHDCATKLKFLLQNPNASNGSFSAKELLANVLRSFTQTISVLTASSYDIEASDEVVNSGENGSQVGANSSNDLRSEDSSEGRKRTLTTTIKGRRGSYKRRRTQHTWTKVSETTNDNHAWRKYGQKEILNSKFPRSYFRCSKKNDQGCRATKQVQRVQENPDMYHTTYIGIHTCKDTLTVPQMITYSDTLDSILMNSNSDSKVPNEKDPSIIKREYYKQDMLSDLKDNLDSTLWSDLKDFEQYKSVIVPPKMKSHNADTVYSCNDFQSLDMDFGVFSSPFSTDFHFDESHLL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0654 316 MobiDBLite consensus disorder prediction 80 112 - -
Lal17g0654 316 ProSiteProfiles WRKY domain profile. 133 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0654 316 Gene3D WRKY domain 123 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g0654 316 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0654 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 303 IPR044810 GO:0003700
Lal17g0654 316 SUPERFAMILY WRKY DNA-binding domain 135 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g0654 316 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 8 303 - -
Lal17g0654 316 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g0654 316 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0654 Lal-Chr17 4646246 4651213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0654 14 228 WRKY Transcription Factor Family AT3G56400 43.721 1.40e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal17g0654 WRKY 9.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0654 - - gmx:100170683 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0654 17 4646246 4651213 Lal17g0654 17 4646246 4651213 ECH
Lal17g0654 17 4646246 4651213 Lal21g0555 21 4090507 4092128 LSH
Lal17g0654 17 4646246 4651213 Lal4g0469 4 3303151 3305538 LSH