Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0632 ATGGCTGTTTTGTCTCTGAATTCGTTGCCTTTAGGGTTTCGATTCCGACCCAGTGATGAAGAACTCATTGATTACTATCTCAGACAGAAGATCAATGGTAATGGTCAAGATGTTTGGGTTATTCGAGAAATCGATGTCTGCAAATGGGAGCCTTGGGATTTACCTGATTTGTCAGTGATAAGGAACAAGGACCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGTAAGTACCCAAATGGGCATCGGTTGAACCGTGCAACCAGTCATGGGTATTGGAAGGCAACAGGCAAGGATCGCAAAATCAAGTCTGGCTCTCTCTTGATTGGAATGAAGAAGACTTTAGTCTTCTACACTGGTCGTGCCCCTAAGGGGAAAAGGACCTATTGGGTTATGCATGAGTACCGTCCTACCCTGAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCATATGTCCTCTGTCGATTATTTAAGAAACAGGATGAGAGTCTCGAAATTCCAAACTGTAATGAAGTGCAGCAGACTACTTCATTTCCTACGGCAGCCAATTCCTCTCCAGAAGAGATACAATCGGCTCCAGCTGTGGCTTCAGGATCCCCATCACAAGTTACAGATGATAAACATCAAGCAGTTGTTCCTGAGAGCTCTGAGGGAACAATATCCAATGTTAGAAACTCCGGTGATTACCATAGTGGCAGATATGAAGCTTATGGTAGACAAATTCAAACTCCGGAACCTGCCACAAAGGAGGAACAGAAGCTGAACATCGATGTAATTTTCGACCCTAAAACCGAGCTATTAGATGTTGAATTTTCCCCTCCAGTACATGCACATATTCCAACAGATTTTTATTGTCAACCCGACAATGAATTAGATGGTCTTTGTGGGCTTGAATATTGTGCAAATGAGACAAGTATTGCAGACTTCTTTGATTCAGATGTTAATTGGGAAGATGTGTCCTACGAGAACTCTGGCAGTGATAAGCAGAAGAGCAATGTCGGGTTATTTCAAAATGATTGGCAGATGGCTTCCCAACCTGATATTAGTATGGGCCAAGTTTTCAATGTAGCCAATGATTATGAGCAACCAATATACTTCAATAATACGGTTCCTAGTAGTGATACTGGAATCAAGATAAGGACTCAACAGGTAGAAAATGAACAGCCAAACAAATGTATGGGCCAAGTGTACAATGTACCAAATGATTATGAGCAACCAATAAACTATAACAATAATAATAATAATATGGTTGCTAGTGCTGATGCTGGAATCAAGATAAGAACTCGACAGGTACAAAATGAACAGCCAAATCGAAACTTCGCAGAGCAAGGTACTGCACATAGGAGAATTCGTTTGGCTAGGAAAATTGCAGTTCCCTCAAGTTGTGCAGGAGAAGGGCATAATTTAAAACCAGTCACTGAAGGGGAGAAGAAAGATTCAGAAAATCACGCTGCGGATGAGACTTCTACAGCTACTAGCAATGTGAAACAATCCTGGAAAGCATCTAAGTCAACTGACAGTACAAAAATTTCTCTACAAGTTTTAAATGCCGATTCGGGCCGAGGGTTAAAAGACATCGTATTGCTGAGAAGGGTTCCTTTCACATCAAAGGCCTCCTCCAATCTTACATTGTGGTCTTCTGTTATTGTAGTTTCTTTCATTGCAGTAATCTCATTAGTACTATTTGCTAACATATGGGGATATGCTTAA 1710 0.4158 MAVLSLNSLPLGFRFRPSDEELIDYYLRQKINGNGQDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATSHGYWKATGKDRKIKSGSLLIGMKKTLVFYTGRAPKGKRTYWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEIPNCNEVQQTTSFPTAANSSPEEIQSAPAVASGSPSQVTDDKHQAVVPESSEGTISNVRNSGDYHSGRYEAYGRQIQTPEPATKEEQKLNIDVIFDPKTELLDVEFSPPVHAHIPTDFYCQPDNELDGLCGLEYCANETSIADFFDSDVNWEDVSYENSGSDKQKSNVGLFQNDWQMASQPDISMGQVFNVANDYEQPIYFNNTVPSSDTGIKIRTQQVENEQPNKCMGQVYNVPNDYEQPINYNNNNNNMVASADAGIKIRTRQVQNEQPNRNFAEQGTAHRRIRLARKIAVPSSCAGEGHNLKPVTEGEKKDSENHAADETSTATSNVKQSWKASKSTDSTKISLQVLNADSGRGLKDIVLLRRVPFTSKASSNLTLWSSVIVVSFIAVISLVLFANIWGYA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0632 569 MobiDBLite consensus disorder prediction 462 500 - -
Lal17g0632 569 Pfam No apical meristem (NAM) protein 10 135 IPR003441 GO:0003677|GO:0006355
Lal17g0632 569 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lal17g0632 569 MobiDBLite consensus disorder prediction 470 485 - -
Lal17g0632 569 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lal17g0632 569 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 2 483 - -
Lal17g0632 569 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 483 - -
Lal17g0632 569 MobiDBLite consensus disorder prediction 486 500 - -
Lal17g0632 569 MobiDBLite consensus disorder prediction 177 204 - -
Lal17g0632 569 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0632 Lal-Chr17 4480252 4484113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0632 1 191 NAC Transcription Factor Family AT4G35580 68.229 1.10e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal17g0632 NAM 6.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0632 - - lang:109338230 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0632 17 4480252 4484113 Lal17g0632 17 4480252 4484113 ECH