Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0555 ATGGGTACTATCTTGGTAATAATCTCTTGTTCAATTGTGTTGTTTTGCATGCTTTGTTTTAATCTACACCTTGCACTTGCCTTTGATATTTGTCCAGATCAATCATGTGGAAATATGGTTATCAAATTCCCTTTCAAAATAAAAGGGAAGAAGACTCCACAACACTGTGGCTATCCTGGGTTTGATTTAGTTTGTACTGCAAATAATGAAACTGTGATTGAACTCCCTTCCTCAGTGAAGCTCAGTGTTAAGAATATTGACTACAAAAGGCAAAGAATTGTGTTACATGATACACAAGAGTGCCTTATAAGTCAACTCCATAAATTCACATTATTTTCTTCCAATTTCAAGTTCATAGCCAAGATTTCTGAAGGCTATAACTTTTTTAACTGTTCATTAGCTGATAGAGATTTGTATTCACACTATATGGTTCCTTGCCTAACCACATCAAATTCCGAACTATATGCTATTCCAGCTGAAGCAATGATAGAGAGCCTGCCACTGTCACTTTGCACCAAAATGTTTAATATTTCATCATTCCCTGTAGACTTTATTCGTAAGAGCAATATTCTTGAATTGTTATGGTCTGAGCCAAATTGTAAAGATTGTGAATCAAATCGGAACAGATGCGGGTGGAAGAATTATGGTGTCAATAATGAAACTCAATGCTTTGTCAATCACAAAGGTTCATCAACAGTTCTATTAACCGCAGGACCAGTTCTAGGATCGTCGTTTGTTGTCTTCTTGGTTTGTGCAGTCTATCATTTCTATGATTCCTACACACGCCGAAAAGAAATGCAAGTAATTTTTGATAAGTTTCTCGAAGACTATAGAGCTCTCAAGCCTACTAGATACTCATTTGCCGAGCTTAAGAGAATCACCAACAATTTTGCAGACAAGTTAGGCGAGGGAGCTTATGGAATTGTGTTCAAAGGAAATGTTTCGAAAGAGTTTATTGTTGCTGTGAAAATGCTGAATAACTCTCAAGGAAATGGAGAAGAGTTCATTAATGAAGTTAGTACAATGGGTAGAGTCCATCATGTTAACATTGTTCGTTTGGTTGGTTTCTGTGCTGATGGTTTTAAAAGAGCTCTTGTTTATGAGTTCATGCCAAATGGTTCACTACAAAACTTCAAAAACTCACCAAACAACAAGAAAAGCTTCCTTGGTTGGCAGAAGTTGCATGAAATTACATTAGGCATAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAGCGCATTGTCCATTTTGATATCAAACCTCAAAATGTTTTATTAGATAGCACCTTTACTCCAAAAATTTGTGATTTTGGTCTATCCAAATTGTGTTCCAAGGAACAAAGCTTGGTATCTATGACAACAGCGAGGGGAACATTGGGCTATATCGCGCCAGAAGTTTTCTTAAGAAACTTCGGAAATGTATCTTACAAGTCAGATGTTTATAGTTATGGAATGATGACGGTTGAAACAATAGGAGGAAGGAAGATCACGGAGGAAATGGAGGAGAACACTAGTCATGTTTACTACCCGGAATGGATTTATAATCTTTTAGATGAAGGGGAAGAAATGAGAATTCATATTGATAATGAAGAGGATGCAAAAATAGCAAGAAAACTTGCAATTGTGGGACTTTGTTGCATTCAATGGCACGCTGCGCATCGACCATCAATGCAAATGGTGATTCAAATGTTGGAAGGAAATGAAGACAGATTACAAGTACCCCCTAATCCTTTTGCTTCTGCAGCTACAAGAAGAAAATTTGGTAGTGCAGGTATTGCTGCTATGCAATTAAACCAAGGTTTAGAAGTAATTCAAGAGTTAGAGTAA 1833 0.3688 MGTILVIISCSIVLFCMLCFNLHLALAFDICPDQSCGNMVIKFPFKIKGKKTPQHCGYPGFDLVCTANNETVIELPSSVKLSVKNIDYKRQRIVLHDTQECLISQLHKFTLFSSNFKFIAKISEGYNFFNCSLADRDLYSHYMVPCLTTSNSELYAIPAEAMIESLPLSLCTKMFNISSFPVDFIRKSNILELLWSEPNCKDCESNRNRCGWKNYGVNNETQCFVNHKGSSTVLLTAGPVLGSSFVVFLVCAVYHFYDSYTRRKEMQVIFDKFLEDYRALKPTRYSFAELKRITNNFADKLGEGAYGIVFKGNVSKEFIVAVKMLNNSQGNGEEFINEVSTMGRVHHVNIVRLVGFCADGFKRALVYEFMPNGSLQNFKNSPNNKKSFLGWQKLHEITLGIAKGIEYLHQGCDQRIVHFDIKPQNVLLDSTFTPKICDFGLSKLCSKEQSLVSMTTARGTLGYIAPEVFLRNFGNVSYKSDVYSYGMMTVETIGGRKITEEMEENTSHVYYPEWIYNLLDEGEEMRIHIDNEEDAKIARKLAIVGLCCIQWHAAHRPSMQMVIQMLEGNEDRLQVPPNPFASAATRRKFGSAGIAAMQLNQGLEVIQELE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0555 610 ProSiteProfiles Protein kinase domain profile. 295 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0555 610 PANTHER RECEPTOR-LIKE KINASE 38 609 - -
Lal17g0555 610 Gene3D Phosphorylase Kinase; domain 1 271 369 - -
Lal17g0555 610 SUPERFAMILY Protein kinase-like (PK-like) 279 567 IPR011009 -
Lal17g0555 610 Pfam Protein kinase domain 299 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0555 610 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 609 IPR045874 GO:0004672
Lal17g0555 610 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lal17g0555 610 Gene3D Transferase(Phosphotransferase) domain 1 370 575 - -
Lal17g0555 610 SMART serkin_6 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0555 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Lal17g0555 610 Pfam Wall-associated receptor kinase galacturonan-binding 31 97 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0555 Lal-Chr17 3915583 3918226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0555 15 579 Receptor kinase-like Gene Family AT1G66910 36.842 7.82e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal17g0555 Pkinase 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0555 - - lang:109328752 1093.57