Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0551 ATGATATATCTGAGATGCCCATATCCAATGAGTTCATCTGATGGCACTGCAGCTTGCATGAATGATGATAATCCATATGGGGAAGGGAGTATTTTCTATGTTAATGTTGATAACAAGTCTCTTTGGGATTTGGGGCTGGGAGACTCATGTCGCATAGAGTTTATGTATCTGACATCTTGGCCTGCTGAATACTACAATCAAAGCAACATTTCATGCACAGATATTCATAATATGCTGCTTTATGGCTTTGAACTTTCTTGGCTGAAAGCTTTCTGTGATGATGTGAAAGTTGCCATCCTTGATGGCCATGGCCATCCTTATTGTTCAGTAGTGTATGCAATTTCGGCTGCGATCATAATCAATTTTCTGCGAGGTGATAATAGCTATCTGATGCCTATAAGGTACTCTTACAAAGACATTAAGAGAATAACAGAAGGATTCAAGATAAAGCTAGGGAGTGGTGGCTTTGGCTCTGTTTTCAAAGGACAACTTCGAATTGGCCGTCTTGTAGCGGTTAAGGTATTGGACAAAGCCAAAGCAAGTGGCCAAGATTTCATAAATGAAGTTGCTACTATTGGAACAACTCACCATGTTAATGTGTACATTTTTTCACATGAAGAGGGTTCTTCCTTAAGTTGTGAAATGTTGTACTCCATTTCTCTTGGAATTGCTCGTGGTATTGAATACCTTCATAATGGCTGCAATATGAAAATTCTCCACTTTGACATCAAGCCTCATAATATCCTTCTTGATGAGAAATTCAATCCAAAAGTTTCCGATTTTGGACTCGCCAAACTTTACCCTACAGATAATAGCGTTGTGTCTTTGACTGCCGCAAGAGGAACCATAGGATACATGGCTCCTGAGCTCCACTATAGAAATATTGGCACAATCTCCTACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTGGTAGAAGGAAGAACTTGAATGCATTGGCTGAGAATTACAGCCAACTTTATTACCCATTTTGGATTTACGATCAGTGA 1023 0.3969 MIYLRCPYPMSSSDGTAACMNDDNPYGEGSIFYVNVDNKSLWDLGLGDSCRIEFMYLTSWPAEYYNQSNISCTDIHNMLLYGFELSWLKAFCDDVKVAILDGHGHPYCSVVYAISAAIIINFLRGDNSYLMPIRYSYKDIKRITEGFKIKLGSGGFGSVFKGQLRIGRLVAVKVLDKAKASGQDFINEVATIGTTHHVNVYIFSHEEGSSLSCEMLYSISLGIARGIEYLHNGCNMKILHFDIKPHNILLDEKFNPKVSDFGLAKLYPTDNSVVSLTAARGTIGYMAPELHYRNIGTISYKADVYSFGMLLMEMAGRRKNLNALAENYSQLYYPFWIYDQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0551 340 Pfam Protein kinase domain 210 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0551 340 ProSiteProfiles Protein kinase domain profile. 145 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0551 340 SUPERFAMILY Protein kinase-like (PK-like) 128 329 IPR011009 -
Lal17g0551 340 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 201 340 - -
Lal17g0551 340 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 121 200 - -
Lal17g0551 340 PANTHER RUST RESISTANCE KINASE LR10-RELATED 121 200 IPR045874 GO:0004672
Lal17g0551 340 PANTHER RUST RESISTANCE KINASE LR10-RELATED 201 340 IPR045874 GO:0004672
Lal17g0551 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lal17g0551 340 Pfam Protein tyrosine and serine/threonine kinase 149 201 IPR001245 GO:0004672|GO:0006468
Lal17g0551 340 Gene3D Phosphorylase Kinase; domain 1 124 200 - -
Lal17g0551 340 Gene3D Transferase(Phosphotransferase) domain 1 201 337 - -
Lal17g0551 340 SMART serkin_6 145 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0551 340 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0551 Lal-Chr17 3882469 3892406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0551 134 338 Receptor kinase-like Gene Family AT5G38260 47.639 8.43e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal17g0551 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0551 - - aip:107607706 424.091