Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0534 ATGGTTAGGAGTTCCTTAGACTGGGACAGCCGCTTGAGAATTGCGATTGGCGCAGCAAGAGGCATTGCTCACATCCATGCTCAAATTGGAGGGAAGCTCATACATGGAAACATAAAAGCTTCAAACATCTTCCTCAACTCACAAGGATATGGTTGTATATCCGATATCGGATTGGCAACACTGATGAATCCGATATCCCCGTCAGCAATGAGGATAGCAGGATACCGTGCTCCAGAAGTAATAGACAACCGAAAAGCAACACATGCATCTGATGTCTACAATTTTGGGGTTCTGCTATTTGAGCTTCTAACCGGGAAATCGCCCGCAAACACAAGAAGTGAGGAGGTTGTCAACTTGGTTAGATGGGTGAATTCTGTGGTGAGAGAAGAGTGGACTGCAGAAGTGTTTGATGTAGAGCTGTTGAGGTATCCAAATATAGAAGAAGAAATGGTAGAAATGCTACAAATAGGGTTGGCTTGTGCAGCAAGAATACCAGATCACAGACCAAAAATGAGAGACGTGGTGAGAAAAGTAGAGGAAATTCCTCGTGTAAATACTGGAAATGGACCATCTAACTAG 579 0.4387 MVRSSLDWDSRLRIAIGAARGIAHIHAQIGGKLIHGNIKASNIFLNSQGYGCISDIGLATLMNPISPSAMRIAGYRAPEVIDNRKATHASDVYNFGVLLFELLTGKSPANTRSEEVVNLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGLACAARIPDHRPKMRDVVRKVEEIPRVNTGNGPSN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0534 192 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0534 192 Pfam Protein tyrosine and serine/threonine kinase 5 177 IPR001245 GO:0004672|GO:0006468
Lal17g0534 192 PANTHER OS05G0588300 PROTEIN 3 191 - -
Lal17g0534 192 SUPERFAMILY Protein kinase-like (PK-like) 4 177 IPR011009 -
Lal17g0534 192 Gene3D Transferase(Phosphotransferase) domain 1 2 188 - -
Lal17g0534 192 SMART tyrkin_6 1 178 IPR020635 GO:0004713|GO:0006468
Lal17g0534 192 PANTHER INACTIVE RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0534 Lal-Chr17 3719869 3720447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0534 3 181 Receptor kinase-like Gene Family AT4G23740 63.889 2.26e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal17g0534 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0534 - - gmx:100809359 296.204