Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0529 ATGTCAAGCAATGCATTAACTCTTTTTATCTTATTCCTTAATATCTCCTTGTTTCCAACCATATCTGCTTTGAACCAAGAAGGTCTCTCTCTACTTGCTTGGTTTTCAACCTTCAATTCCTCTAACTCTGCTATTGCTTTCTCTTCATGGGATCCAACTCACAAAAATCCTTGCAGATGGGACTATATAACATGTTCTAAACAAGGGTTAGTTTCAGAGATCATAATAACTTCCATCAATCTTAGTAGCAGTTTCCCTACACAGCTTATTTCTTTTGACAAACTTACTACTCTTGTAATCTCAAATGCAAATCTAACTGGTGAGATTCCAAGTTATGTGGGAAACTTGTCATCTTTGGTTACTTTGGACCTTAGCTTCAATACCTTATCAGGAACCATTCCAGAAGAAATAGGAAAGCTATCTAAACTTCAATGGTTATTGTTGAATTCAAATGCATTGCAAGGTGGAATTCCAACAACTATTGGAAACTGTTCAAAGCTTCAGCAGCTGATACTATTTGACAACCAGCTATCTGGTATGATTCCTGGAGAAATAGGCCAGTTGAGTGCTCTTGAAGTGCTTAGAGCAGGAGGAAATCAAGGTATTCATGGTGAAATTCCAATGCAGATATCAAACTGCAAGGCTCTAGTATTGCTTGGACTTGCAGATACCGGGATTTCTGGGGAGATTCCGCCGAGTATAGGAGAACTTACAAATCTTAAGACACTTTCAGTTTACACAGCTCATCTCACAGGTCAAATCCCTCCAGAGATTCATAACTGTTCATCCTTGGAAAATTTGTTTCTGTATGAAAACCAGCTTTCTGGAAATATTCCTTATGAATTAGGTTCCATGCAAAGCCTCAGGAGGGTGTTGTTGTGGCAGAACAACTTAACTGGAACCATTACTGAAGGTCTTGGAAACTGTACAAAACTGAAGGTCATTGATTTCTCTTTTAATTCTCTGGTTGGTCAGTTACCTTTGACACTGAGTAGTTTACTCTCATTGGAGGAGTTTCTTTTGTCTGATAATAACATTTCTGGAGAAATACCTTCCTATATTGGCAACTTTTCAAGGCTGAAGCAACTTGAATTGGATAACAACAAATTCACTGGAAAGATTCCACTTGTTATGGGCCAACTGAAGGAACTCACACTCTTCTTTGCCTGGCAGAATCAACTCTATGGAAGCATACCAACAGAACTATCCAACTGTGAGAAACTTGAAGCAGTTGATCTTTCACATAATTTCCTCACAGGTTCAATTCCAAATACTCTCTTTCATCTACAGAATTTAACTCAATTGCTGTTGATATCAAACAGGCTTTCAGGTCAAATTCCACCAGATATTGGGAGTTGCACCAGCTTGATAAGGTTAAGGCTGGGATCAAATAACTTGAATGGTAAAATTCCACCAGAGATAGGCCTTTTAGGTAGCTTGAGATTTCTTGAGTTGTCAGGTAATCAACTCAATGGAGATATTCCCTATGAGATAGGTAACTGTGGTAATCTAGAAATGCTTGATTTTCACAGCAATAAGCTGCAAGGAACAATTCCTTCCTCATTACAATTCCTAGTTGATCTTAATGTCTTAGATCTTTCAGCAAACATATTCACAGGAAGAATTCCTGAAAATTTGGGTAATCTTACATCTTTGAATAAGTTGATTCTAAGTGGAAACAATATCACTGGTTTGATTCCTCGGTCACTCGGATTTTGCAAGGATTTGCAGTTGTTGGATATAAGTAACAACAGGATCACTGGTTCTATTCCTGGTGAGATTGGTTACTTGCAAGGATTAGATATCCTCTTGAACCTTAGTTGGAATTCTTTAACAGGCTTCATTCCTGAGACCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCTCATAACATGCTCACAGGCACCCTCAAAGTGTTGAGTAGTCTTGACAATCTTGTGTCTCTAAATGTGTCTTACAATAAGTTTTCTGGTTCTCTTCCTGATACAAAGTTCTTCCATGATCTACCTGATGCTGCATTTGCTGGTAATCCTGACCTTTGCATTAACAAGTGTTATACAAGTGGACATAACCAAAGTATCAAGTCAGTAAGAAATATTATTGTCTACACATTCCTTGGGGTTATTATAACTTCTGGTTTTGTAACATTCGGAGTAATTTTAGCTCTCAGAACTCAAGGGGCAACTTTACATAGGAATTTTGATGAAAGTGGTGACATGGAGTGGGCTTTCACTCCATTCCAAAAACTCAACTTCTCCATCAATGACATTGTCACAAAGTTATCAGATTCAAACATTGTAGGAAAAGGTTGCTCCGGAGTTGTTTATCGTGTAGAGACTCCAACAAGACAGGTTATTGCAGTGAAGAAGCTATGGCCAATAAAGAATGAAGAGCCACCAGAGAGAGATCTGTTTTCTGCAGAAGTTCAAACCCTTGGATCAATAAGACATAAAAATATAGTCAGACTTTTAGGATGTTGTGACAATGGAAGAACTAGGTTGCTCTTGTTTGATTACATATGTAATGGGAGTTTGCATGCATTGCTTCATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAGTAGCTCATGGTTTAGAATATCTTCATCATGATTGTATCCCTCCGATAGTCCATCGTGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTCTTGCTGATTTTGGCCTTGCAAAACTTTTAAGTTCTTCAGGTTGTTCAGGAGCCACTGACAATGTTGCAGGCTCTTATGGATATATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTATAGTTATGGTGTTGTGCTCCTTGAGGTCTTAACAGGAATGGAGCCAACTGATAACAGGATTTCAGAGGGTGCCCACATTGTCACATGGATAAGTAGTGAAATCAGAGAACAGAAAAGAGAATTCACATCAATCCTTGACCAGCAACTGATACTGCAGTGTGGAACAAGAACACAGGAAATGCTTCAAGTGCTAGGTGTGGCTCTCCTCTGTGTGAATCGATCCCCGGACGAACGGCCTAAAATGAAAGATGTAACAGCAATGCTCAAGGAGATTAAGCAGGAAAATGATGATTTTCAGAAACCAAATTTTCTCCATAAAGGCATTGTTACCAATCCAAAAGTAGCAGTTCATTGTTCCAGTTTCTCCAGATCATGTGAACCTCTTATTGAAACACCATCTTCTTCTTTCCAAATTGGTAACTAG 3273 0.3859 MSSNALTLFILFLNISLFPTISALNQEGLSLLAWFSTFNSSNSAIAFSSWDPTHKNPCRWDYITCSKQGLVSEIIITSINLSSSFPTQLISFDKLTTLVISNANLTGEIPSYVGNLSSLVTLDLSFNTLSGTIPEEIGKLSKLQWLLLNSNALQGGIPTTIGNCSKLQQLILFDNQLSGMIPGEIGQLSALEVLRAGGNQGIHGEIPMQISNCKALVLLGLADTGISGEIPPSIGELTNLKTLSVYTAHLTGQIPPEIHNCSSLENLFLYENQLSGNIPYELGSMQSLRRVLLWQNNLTGTITEGLGNCTKLKVIDFSFNSLVGQLPLTLSSLLSLEEFLLSDNNISGEIPSYIGNFSRLKQLELDNNKFTGKIPLVMGQLKELTLFFAWQNQLYGSIPTELSNCEKLEAVDLSHNFLTGSIPNTLFHLQNLTQLLLISNRLSGQIPPDIGSCTSLIRLRLGSNNLNGKIPPEIGLLGSLRFLELSGNQLNGDIPYEIGNCGNLEMLDFHSNKLQGTIPSSLQFLVDLNVLDLSANIFTGRIPENLGNLTSLNKLILSGNNITGLIPRSLGFCKDLQLLDISNNRITGSIPGEIGYLQGLDILLNLSWNSLTGFIPETFSNLSKLSNLDLSHNMLTGTLKVLSSLDNLVSLNVSYNKFSGSLPDTKFFHDLPDAAFAGNPDLCINKCYTSGHNQSIKSVRNIIVYTFLGVIITSGFVTFGVILALRTQGATLHRNFDESGDMEWAFTPFQKLNFSINDIVTKLSDSNIVGKGCSGVVYRVETPTRQVIAVKKLWPIKNEEPPERDLFSAEVQTLGSIRHKNIVRLLGCCDNGRTRLLLFDYICNGSLHALLHEKRLFLDWDARYKIILGVAHGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLLSSSGCSGATDNVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEVLTGMEPTDNRISEGAHIVTWISSEIREQKREFTSILDQQLILQCGTRTQEMLQVLGVALLCVNRSPDERPKMKDVTAMLKEIKQENDDFQKPNFLHKGIVTNPKVAVHCSSFSRSCEPLIETPSSSFQIGN 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0529 1090 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Lal17g0529 1090 Pfam Leucine rich repeat 604 658 IPR001611 GO:0005515
Lal17g0529 1090 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Lal17g0529 1090 Pfam Leucine rich repeat 528 586 IPR001611 GO:0005515
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 422 519 IPR032675 -
Lal17g0529 1090 Gene3D Transferase(Phosphotransferase) domain 1 842 1058 - -
Lal17g0529 1090 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Lal17g0529 1090 SMART LRR_typ_2 645 678 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 333 357 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 549 572 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 140 164 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 597 621 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 477 501 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 429 453 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 285 309 IPR003591 -
Lal17g0529 1090 SMART LRR_typ_2 116 139 IPR003591 -
Lal17g0529 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 219 325 IPR032675 -
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 326 421 IPR032675 -
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 604 690 IPR032675 -
Lal17g0529 1090 SUPERFAMILY Protein kinase-like (PK-like) 760 1059 IPR011009 -
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 140 217 IPR032675 -
Lal17g0529 1090 PANTHER LRR RECEPTOR-LIKE KINASE 3 1059 - -
Lal17g0529 1090 SMART serkin_6 763 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Lal17g0529 1090 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Lal17g0529 1090 ProSiteProfiles Protein kinase domain profile. 763 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0529 1090 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Lal17g0529 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1059 - -
Lal17g0529 1090 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Lal17g0529 1090 Gene3D Phosphorylase Kinase; domain 1 730 841 - -
Lal17g0529 1090 SUPERFAMILY RNI-like 330 663 - -
Lal17g0529 1090 Gene3D Ribonuclease Inhibitor 520 603 IPR032675 -
Lal17g0529 1090 PRINTS Leucine-rich repeat signature 119 132 - -
Lal17g0529 1090 PRINTS Leucine-rich repeat signature 622 635 - -
Lal17g0529 1090 SUPERFAMILY L domain-like 53 395 - -
Lal17g0529 1090 Pfam Protein kinase domain 766 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0529 Lal-Chr17 3695999 3699894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0529 23 1076 Receptor kinase-like Gene Family AT5G56040 46.826 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal17g0529 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0529 - - gmx:100807225 1761.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0529 17 3695999 3699894 Lal17g0529 17 3695999 3699894 ECH