Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0527 ATGGAGGCTAAGAATTATAAGATATCAGAAGTGGTGCCATTTATAACGATGGTGATTTTTGAAGGCTGCACTATAGCACTTACAATTTTTGCAAAAACTGAAATAACTAATGGGATGAGCCCATTTGTGTTCATTTTTTATACCAATGCTTTGGCCACTATCATTTTCTTTCCTTGTTCCTTTGTATTACACAACGAGGACAGAAAGGAACACCCACCTTTTACTTTCTCTTTGTTTATGCGACTTTTGCTCCTGGGTTTTACAGGTGTAATCATGACTCAGATATTTTCATTCTTGGGTCTAAGCTACAGTTCTCCAATACTTGTATGTACCATGGGCCACTTGATCCCAACCTTTAATTTCCTCCTCTCCCTAATTTTCAGGAAGAGAGAGTTGAATCTTAGAAGCTATGGTATCCAAGTCCAACTTATTGGTATTCTGATATCTATAATGGGAGCATTGCTAGCTGAGTTTTTCAAGGGTCCACTTATAAGACCCTCTTCTCACAAGCTTAGACACACTAAACAACTTTTTGTCTTCTCTTCAACACCTGAGTTTTGGGCTCTTGGTGGCATTTTGCTTGCTTCAGCTTCCTTCTCAGTTGCACTTTGGAACTTTATCCTGGTTGAAACTGTTAGGCAATATCCAAAACCAATGAAAGTGGTTTCTTATTCTAGCTTATTTGGCACAATTCTCAGTGCAATAGTAGCATGGGTAGTGGAGAATGACACAAATGCATGGAAGCTAAACCATAACATGGAGCTTATTCTCATTGTTCTAACAGCATTATTTGGAGGTGTGGTTCGACCCAATGTTCAATATTGGTTCACTCGCATGAAAGATCAATTTTATGTGCCATTGTTCAAGCCCTTTGGTATTGCCTTTGCTACCACGTTTTCAGTTTGCTTTTTTCCTAATACCCTTCACTACGGAAGTGTTATAGGTGCAACTATACTAGGAATGGGGTATTATACTGTAATGTACGGACAAATCAAAGGAGATGAACATGAAGAGAGAAGCTGTGACGAAAGCTCAGATTCTTTGGACAAGAAGATACCTCTTTTGCAAGAAAAGATTGAAGTATAG 1086 0.3858 MEAKNYKISEVVPFITMVIFEGCTIALTIFAKTEITNGMSPFVFIFYTNALATIIFFPCSFVLHNEDRKEHPPFTFSLFMRLLLLGFTGVIMTQIFSFLGLSYSSPILVCTMGHLIPTFNFLLSLIFRKRELNLRSYGIQVQLIGILISIMGALLAEFFKGPLIRPSSHKLRHTKQLFVFSSTPEFWALGGILLASASFSVALWNFILVETVRQYPKPMKVVSYSSLFGTILSAIVAWVVENDTNAWKLNHNMELILIVLTALFGGVVRPNVQYWFTRMKDQFYVPLFKPFGIAFATTFSVCFFPNTLHYGSVIGATILGMGYYTVMYGQIKGDEHEERSCDESSDSLDKKIPLLQEKIEV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0527 361 PANTHER WAT1-RELATED PROTEIN 9 358 IPR030184 GO:0016021|GO:0022857
Lal17g0527 361 Pfam EamA-like transporter family 190 326 IPR000620 GO:0016020|GO:0016021
Lal17g0527 361 Pfam EamA-like transporter family 17 155 IPR000620 GO:0016020|GO:0016021
Lal17g0527 361 PANTHER WAT1-RELATED PROTEIN 9 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0527 Lal-Chr17 3670529 3673551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0527 1 360 Nodulin-like Gene Family AT1G70260 45.845 2.05e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0527 - - var:108330423 551.977