Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0517 ATGGTGCCCCCGGGGCCACCCACTCCTATTGGTGGTGCCCAGTCTGTCAATGCTTCTCATTTGAGATCAAATTCAGGGATGTTAGGAGGTCAAGGGGGTCCTGTTCCTTCACAAAATTCTTTCCCTTCGCTTGTGTCACCGCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCGAATGCAACTTCCATGCTTAATCAATCTTTCCCAAACGGAATTCCAAATCATGGGCTTTCGGGACCAGGAAGTAGCCAGCGTGGAGTGGTTGATACTGGAGCTGAGACAGATCCACTCTCCAATGTTGCCAATGGAATGAACTTCAGCAATTCTTCATCCTCATTTGTACAAGCAAATATGGTGAATGCTGGTGGTTCTTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTGGTAATCAACAGCTTGAACCTCAAAGTTTCCAACATAGTCAGCAGTCAATGCAGCAGTTCTCTGCTCCTCTGAGTACACAGCAGCAACAGCAGCAGCAACACTTTCAATCAATTCGAGGAGGGATAGGTGGTATGGGACCAGTGAAGTTGGAGCAACATGTAAATAATGATCAACTTGGACAGCAGCAGCAACATCAGTTGCAATCATTGAGGAGTCTTCCTCCAGTGAAACTGGAACCGCAACAACTTCAAACAATGAGAACTCTTCCACCAGTAAAAATGGAGCCCCAACATTCTGATCAACCATTGTTTTTGCATCAGCAACAACAACAGCAGCAACAACAGCAACAACAACAGCAGCAACAACAGCAACAACAGCAACTCCTCCACATGTCTAGGCAATCATCTCAGGCTGCTGCTCATTTTAATCTTTTGCATCAACAGAGGATTTTGCAATTACAGCAACACCAGCAGCAGCAACTCTTGAAGACAATGCCTCAACAACGGCCTCAATTTCCACAACAATTTCAACAGCAGAATATGCCTATTCGCTCTCCTGTGAAACCATCATATGAACCTGGGATGTGTGCTAGGCGTCTGACACACTACATGTATCAGCAACAGCATAGGCCTGAAGATAACAATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTTTGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCCCAGGATGTATGGCACTGCGAAATATGCAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTATAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTGCTTTATGTTGACATGCCACGCGAATATCATAATTCTTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTCTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCAAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGAGGCATGAAGAGCTCATCCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGTCTCTTACTCAAAGTGCCACACCAAATATATCTGTTCCGGAGTTACAAAATAATTGCAATATGTTTGCTTCATCAGCCCGTCAGTTGGCTAAAGCTTTAGAAGTTCCATTAGTTAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCGGAAGTGGTAAATAGTATGAAAGACTTAATAGATTACAGCAGAGAAACAGGGACTGGGCCTATGGAGAGCTTAACCAAATTCCCTCGGAGAAATTGTGGTTCAGCTGGACCTCGTGGTCAAGCACAACAACATGAAGATCAATTACAGCAACAGCAAATGTTGGCTCATAACTCAAATGGAGATCAAACTCCATCTTCACAACCCACTGCCGTGCAACTTGCTTCTAACAATGGTATCATCGGTATGGTTAGTATAAATAACTCTATTAGCTCAGCACCTGCTTCAACCACCACAAGCACTATTGTAGGACTTCTCCACCAAAACTCTATGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGTCCTTATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGCTCCTCCAATACTATGCCACAGGCCCAACCAAACTTATCCTCTTTTCAAGCACCAACACCATCTTCATCTAACAACCCCCAACAAGCATCTCACCCTTCCTTAACTTCTGTCAATCACATGAATACTACAAACTCACCGGCTAATATTTCCATGCAACAACAGCAGCCATCTCTTTCCGGTGAAGCTGACCCGGCCGATGCTCAGAGCTCAGTCCAGAAATTCATACATGAGATGTTGATGTCATCCCAGATGAACGCCTCAGGTGGGATGGTTGGTGTTGGTTCTCTTGGAAACGATATGAAAAATGTAAATGGTATTCTGCCAATGAGTACAAATACCGGGCTGAACAGTGGCAATGGCATGATGGGCAATGGCGCACTTAGCAGTAATTCAGGTGTCGGGATTGGTAGTTATGGAACAATGAATCTTGGTCAATCTGCTATTACTAATGGAATGAGAGCTGCTATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCATCTGTTGCTAGGGATCAAGCTATGAATCATCAACAAGATTTGTCAAATCAACTACTCAGCGGGCTAGGATCTGTAAACGGTTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2739 0.433 MVPPGPPTPIGGAQSVNASHLRSNSGMLGGQGGPVPSQNSFPSLVSPRTQFNNMNILGNMSNATSMLNQSFPNGIPNHGLSGPGSSQRGVVDTGAETDPLSNVANGMNFSNSSSSFVQANMVNAGGSSGQGQGQQFSNPSGNQQLEPQSFQHSQQSMQQFSAPLSTQQQQQQQHFQSIRGGIGGMGPVKLEQHVNNDQLGQQQQHQLQSLRSLPPVKLEPQQLQTMRTLPPVKMEPQHSDQPLFLHQQQQQQQQQQQQQQQQQQQQQLLHMSRQSSQAAAHFNLLHQQRILQLQQHQQQQLLKTMPQQRPQFPQQFQQQNMPIRSPVKPSYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSQDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSLTQSATPNISVPELQNNCNMFASSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLTKFPRRNCGSAGPRGQAQQHEDQLQQQQMLAHNSNGDQTPSSQPTAVQLASNNGIIGMVSINNSISSAPASTTTSTIVGLLHQNSMNSRQNSMNNASSPYGGSSVQIPSPGSSNTMPQAQPNLSSFQAPTPSSSNNPQQASHPSLTSVNHMNTTNSPANISMQQQQPSLSGEADPADAQSSVQKFIHEMLMSSQMNASGGMVGVGSLGNDMKNVNGILPMSTNTGLNSGNGMMGNGALSSNSGVGIGSYGTMNLGQSAITNGMRAAMGNNSVMNGRGGMASVARDQAMNHQQDLSNQLLSGLGSVNGFNNLQFDWKPSP 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0517 912 Coils Coil 245 267 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 121 189 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 605 620 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 241 274 - -
Lal17g0517 912 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 911 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 12 45 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 680 773 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 72 96 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 232 274 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 680 770 - -
Lal17g0517 912 Pfam LIM-domain binding protein 339 593 IPR029005 -
Lal17g0517 912 MobiDBLite consensus disorder prediction 1 45 - -
Lal17g0517 912 PANTHER LIM DOMAIN-BINDING PROTEIN 1 911 IPR029005 -
Lal17g0517 912 MobiDBLite consensus disorder prediction 121 178 - -
Lal17g0517 912 MobiDBLite consensus disorder prediction 583 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0517 Lal-Chr17 3593395 3603003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0517 1 908 C2H2 Transcription Factor Family AT1G43850 59.286 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0517 - - gmx:100787573 1342.79