Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0516 ATGTCCCAGGGAAGAGGCAGTGCGTCTTTACCTATGGCTATGGTGACCTTGATCACCATAGTTTGCATGTTGGTTCTAGTGGAACATGCTAATGCAGCAACTTACACCGTTGGAGGACCTGGGGGTTGGACCTTCAACACTGCTAGTTGGCCCAAAGGGAAAACATTTAGAGCTGGTGATCTTCTAATCTTCAACTATGACTCAACAAGCCACAATGTGGTTGCTGTGGATAGAAGTGGATACAGTAGTTGCAAGACTCCTGGAGGTGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATAAGGCTAACAAAAGGGGTTAACTACTTCATATGTAACTATCCTGGTCACTGTGAATCTGGAATGAAGGTTGCCATCACTGCAGTGTGA 387 0.4574 MSQGRGSASLPMAMVTLITIVCMLVLVEHANAATYTVGGPGGWTFNTASWPKGKTFRAGDLLIFNYDSTSHNVVAVDRSGYSSCKTPGGAKVFSSGKDQIRLTKGVNYFICNYPGHCESGMKVAITAV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0516 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
Lal17g0516 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Lal17g0516 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Lal17g0516 128 Gene3D - 33 128 IPR008972 -
Lal17g0516 128 PANTHER BLUE COPPER PROTEIN 9 126 IPR039391 GO:0009055
Lal17g0516 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Lal17g0516 128 CDD Plantacyanin 33 127 IPR041844 -
Lal17g0516 128 PANTHER BASIC BLUE-LIKE PROTEIN 9 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0516 Lal-Chr17 3588752 3590080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0516 1 128 Phytocyanin Superfamily AT1G17800 41.007 9.67e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0516 - - gmx:100788635 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0516 17 3588752 3590080 Lal17g0516 17 3588752 3590080 ECH