Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0512 ATGAAGCATAAACACGAACCCGACACGAAACTTGGACAAAGCCTGAAACATAGGACATTGGACACCAAACTATATATGTGCAAGTCAAATGAAGATTTTTATATTCACTCTCTATTAGATATGATGAATAATCAATGGTTGCTACCACAATATTTTAGTGTTCCATTCACCAATCTTATGCTAAATAACCTTCAGGCTCTAACTTATAGAGTAGGACACCACTCTACATCAGATGATTCAACCAAGTACAGGCCAAATGATGAGATTGAATATTGGAAAATGGCAAGAAATCCTGTGAATAAATTCAAAAGATGGGTGGAAAGGAATGGTTGGTGGAGTGACAAGGATGAAATGGAGATTAGAAGCAGTGTCAGGAAGCAGTTATTGGAAGCAATAAAGTTGGCTGAGAAAGAACAGAAACCTCCACTTGAGGACATGTTCAAGGATGTCTATGACCAATTGCCATCAAACCTTAAGGAGCAAGAGAGACAACTTAGAGAAACAATCAAGAAGCATCCCATAGATTACCCTTCTGATGTTCCTTTGTAG 549 0.3807 MKHKHEPDTKLGQSLKHRTLDTKLYMCKSNEDFYIHSLLDMMNNQWLLPQYFSVPFTNLMLNNLQALTYRVGHHSTSDDSTKYRPNDEIEYWKMARNPVNKFKRWVERNGWWSDKDEMEIRSSVRKQLLEAIKLAEKEQKPPLEDMFKDVYDQLPSNLKEQERQLRETIKKHPIDYPSDVPL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0512 182 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 65 182 - -
Lal17g0512 182 Pfam Dehydrogenase E1 component 65 142 IPR001017 GO:0016624
Lal17g0512 182 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 66 173 IPR029061 -
Lal17g0512 182 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 1, MITOCHONDRIAL-LIKE 65 182 - -
Lal17g0512 182 Gene3D - 64 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0512 Lal-Chr17 3544869 3550242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0512 68 169 Acyl Lipid Metabolism Gene Families AT1G24180 24.038 5.00e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0512 K00166 - gmx:100796766 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0512 17 3544869 3550242 Lal17g0512 17 3544869 3550242 ECH
Lal17g0512 17 3544869 3550242 Lal4g0634 4 4703084 4723134 LSH