Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0501 ATGTTAGTGCAATACCTGCAACTTCCTAAGAGCACTGATAAGAAAATGCAGTTATATCATCATCCGTTTGATTTGGACAGCCAGAAGGTGAGACTTGCATTGGAAGAGAAAGGAATTGATTATACATCATACCATGCTAATCCGATAACCGGGAAGAATTTGGACTCTTCATTCTTCAACATGAATCATAGTGGAAGTCTCCCTGTTTTTCAAAATGGCTCTCACATCATTTACAAGACAATTGATATAATTCAGTATATCGAAAGAATTGCTGAGGTCTCCTCAGGGTCTGAGACTATCAGTACCAGTGGCAGGGAAGTGACCGAATGGATGCAGAAGATACAAGAGTGGGATCCCAAGTATTTTTCACTATCGCATATACCAGAGAAACACCGAGTTTATGTTTCCAAGTTTATAAGGCGGGTGGTGATTGCTCGTATGGCGGAGTCTCCTGAATTAGCAGGTGCTTACCATAAGAAGTTAAGAGAAGTCTATCAGACAGAAGAAAAATTGAAAGACAGGGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGACTTCTTGATGAAGCGGAGAGGCAGCTGAATGAAACACGTTATTTAGCAGGTGAACAGTTTAGCATGGCTGATTTGATGTTCATTCCATTGTTGGCTCGATTAGTTCTATTGGATTTAGAGGGTGAGTACATAACTAGTAGACCAAACATTGTTGAGTACTGGTTTATGGTTCAGCAGAGACCCAGTTATAAAAAGGTAATTGGTAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTATTGAAAACGTGGTGCTTTGTTTGTATTAGAAGTTTTCTGAAGAGGTACTAA 849 0.3958 MLVQYLQLPKSTDKKMQLYHHPFDLDSQKVRLALEEKGIDYTSYHANPITGKNLDSSFFNMNHSGSLPVFQNGSHIIYKTIDIIQYIERIAEVSSGSETISTSGREVTEWMQKIQEWDPKYFSLSHIPEKHRVYVSKFIRRVVIARMAESPELAGAYHKKLREVYQTEEKLKDRDVLRRSKEHLVRLLDEAERQLNETRYLAGEQFSMADLMFIPLLARLVLLDLEGEYITSRPNIVEYWFMVQQRPSYKKVIGKHFDGWRKHKTLLKTWCFVCIRSFLKRY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0501 282 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 14 95 IPR004045 -
Lal17g0501 282 CDD GST_C_family 162 240 - -
Lal17g0501 282 Coils Coil 174 201 - -
Lal17g0501 282 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 16 282 IPR044617 GO:0004364
Lal17g0501 282 Pfam Glutathione S-transferase, C-terminal domain 176 239 - -
Lal17g0501 282 CDD GST_N_family 16 88 - -
Lal17g0501 282 Pfam Glutathione S-transferase, N-terminal domain 15 89 IPR004045 -
Lal17g0501 282 SUPERFAMILY Thioredoxin-like 10 89 IPR036249 -
Lal17g0501 282 Gene3D Glutaredoxin 9 117 - -
Lal17g0501 282 SUPERFAMILY GST C-terminal domain-like 168 255 IPR036282 -
Lal17g0501 282 Gene3D - 129 253 - -
Lal17g0501 282 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 266 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0501 Lal-Chr17 3476981 3481465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0501 16 282 Glutathione S-transferase Gene Family AT1G77290 68.914 1.28e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0501 K22077 - gmx:100792543 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0501 17 3476981 3481465 Lal17g0501 17 3476981 3481465 ECH
Lal17g0501 17 3476981 3481465 Lal4g0433 4 3033665 3036178 LSH