Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0500 ATGGGCTCTTGTGGGACTTCAGCTATGGTTGATGATCTCTCAGGTGGGCCTGTTGCTGAGAAGCAGTTGTGCTCAGAGTTACTGGTGCAGTGTGTTCCTTTGCAGCAGACATGTTCAAAAGAAGCTTGCAATGAGTTGGACTCTAATGTTGATGTCTCTGGTCTGATGGATTATTGTATGGGTTCGGCTGTAGAGGGCCATGTGGAAACTGCAAGCTTTGTTAATATTTTTGAGGGATCCGGGGATCAATTGGTGAGTGAATGTAAAAATGCTGATAAGTTGCTATTGGAGAATACCTCAGAAGATGATTGTCAGAATCAATCTGGGTCGTGTTGTGGGAATGTTGAAGTTTCTGGTCTAAATAGTGGTGGGTTGTATCCAGAAGGAAATTTCCAAGATGAAGGCAACTTGGACATTCCATCAGAGTCCATAACTGTGATTGGCTTGCCGGAGCATTGTGCTCAACAGAATGAGCGTAAGGATGATAAAAGCAATATATTACCCTTAGAAGGAGATGATTCAGCACTCGCAGAAGCGAGAAACAATGGTGTTGATTTAGTTGATGATGCTTCCAATTGTGTGTCTGTTTTCAGTCATTTTGAAATGTCCTTGAAATCAGAATCTATTGCTCACTTGCTAGTTGATTGCAACCAACAAAATGACTTGGATGACGTTTTGAGAATTGCAGATCCGATGTCAAAGGTTGTGGGAAAATGTGTTGATTATGGTGGGAGGGAAGCTGATGCATGCAAGCAGATCTCTCCCTCACAATTTATGAATGTGTCATCACGTGCATTATATACAGAAGCAGAGAGAACAAGTGATCAGCAATGTGATCAGAAAGACGGTGAGGATTGGGATAGTGAAGAAAAGGTTAAAGCTTTTGCTGATATAGAAAACAACATTATTGATTCATACGCAAGGAAGCACAGAAACTTTACCACAGTCTCCTTAGGAGGGAGTTCACCTGTAGTTGAATCACACTGTGAGCCTACCCTGTTGGATCAGGGGAATAAAATGAATAATAGTATATGTCAAATAGAAGATAGTTTATGTGAATTGAAGAACTGCCCCTCAGAGGAAACAGTCAACTGTACCCTTAGAAAACCATTTTATCCCGAACCAGGTCAGACCTCTGTTGTCATAATCACTAGTAGCTCTTCAAAGGATGTCCATGGTCTGCTTCCCAATGGTGATAATGTTTCCATCAATAATAATGCTGTCAACAATCCTGGACATACGGATATTCTTGAAATCGATTGTACTGCTGAACGAAAACGGTTGCCTTCTCAAAGGAATAGTCGAAGTACAAAACTTGGTCGTAAGACACAATCCAAAAACGCTTCTAGAAGATGCAAGAACAAAGCCAATGCAATGCATCTAGGTGGTTGCATGTTAGAGGCTTCTAGAAAGAAGAGAAGTTGTATCTCCAAACCAGCTCGTTCCTCTATGTGGGGATTGCTTGTGAACATTGAACAGTTTTTTGAGCAAGATAATGTGCTTGGGGCCAGTGAAGCAATGAGCCAAGAATTGGGCACGGCTAGAAGAAAATGTCAAAGTTGCAAAGTGATTAAAAGTGGTGCAAGTTCTAGCTCGTTGGATGCAGTGCAGAAGTGTTCTGCTTCAAATACTCGTTTCCGGTTGAGGGTCAAGATTGGGAAGGAAATTGATTTAAGTCGCTCACATGTTTTAATTCCAGAGACTGTAGATGCTTTGGCTTCTATTTCCTACTTGGGGTGTGGTTCAGGTTCACTGAAAGTAGCTGACACTGCTGAAGAGAAAATTTGTGAAGTGGTTGCTTTAGGCAAGTCAGAATCTTTAAAAAATGAGCCGGAGACAGATGCTATTGTTCTAAATGGACAAACTACAAATAGCCACTTAGAAAATACCTCAATAACGGAGAAGTCAGATGGGGATGCAGAGGAACCGTGTCTTTTGGTTGCTCCAAAGATAGTGGTTGAGCCAACCAATAATAAGGGAATGGATCCTGGAACTTCGCCTGACTCAGAAGTTATCAATACAATTCCGGAAGATCAGGTTGGAGAAGGACACGAAGAATATTTACACCATGCTGTTTTTCGTTCTTCTAAAGAGTCCAGCTCTAATTTGGATGTTACCATCACCAAGAGAGGGAAGAAGAAAGACAACCCTATTTGTGCAAGTGATTGTATATCTGAAGATGGATCACAAGGTCTACCAAAGAATAATAGAGCTAGGAATTCAAGGAACCCCAGACGTAAGAAGAAATCTAGTGCTGCTCTTTGCTCGTCAGAATTGCCTACTCCTACTGAGATAAATGCTTCAAGGGAAACTGTAACCTGTAAAGATTTGTCCGCAGAACCATTGCCCCTTTCTGGAGAGGTTGAACTTGGACACTCTGCCGGGGCTTTGAAAGTTGAGGTGGAAGTTCAGACAACTTGCAAGCGATCCGTTGAACATGAGTTTTCAGAATCCCAGGGGTCTGAGAAATTTCTATCTCCTGCGAAATCTTTGGGGCATAAACTTCCTAGAAGTCTTACCCCTATTAAAGTTAGCAAGATCAAATCTATAGCTTCTGTCTCAACGAGCAAGAAAAATATTACACATAGATGCAATGAGAAACAAAAAAAGTTAACCAATAAGAGTGAAGTGAAGGGAAAAGGTGTCTTGTCTAGAGTTAAGTGTGAATTGGAAGATCACCCACCCACAGAAGTAAATGTTGGAAATCACAAATTGGATGCTGTTGGAGAAAATAATGCTGGTGAAAACAGAGTATCAGTCAATGTATCTAATTTGGACGTGGTACCTGGTGCTGGTTTGGGGGAGCAGCATCTATCACCACGTAATGCATGGGTGCGCTGTGATGATTGTCACAAATGGCGACGCATTCCAGCTGTTCTTGCAGACTTAATTAATGAAACAAATGACACCTGGACATGTAAGGACAACGGGGATAAAACCTTTGCTGATTGCACTATCCCTCAGGAAATGTCAAATGCAGAGATTAATGCTGAGTTGGGAATATCAGATGAAGAAGATGCTTATGATGACTCCAAAAATTATAAGCAATTGGAATATCGACAGCCATCGGTTTCCCAGGAGTCAAATTTTTCCTGTATTTCTACCAACGAGTTTCTGCATCGTAGCCATAAAACTCAGACTATTGATGAGACAGTGACCTTGAAAACGCCATTGTCGTTGCGTATATGGGATTCTTCTTGGACCACAGAGGAAGAGGGCTTGTCAGCAACGAAAGTGATCTACTTGGTACTGGAGACGAGGAGATTTGATTTGTGGTTGGAGTCCATTGCTTCTGCTGCTGCAGACTGTAGCGATTCAATAATGGTCTGCCATTGCAAGCCACCTCAAGAAGGCAAGTTGGGCTGTGGGGATGAATGTCTAAACCGGATTCTTAACATCGAATGTGTGCATGGAACCTGCCCATGTGGGGATCGTTGTTCCAATCAACAGTTCCAAAAGCGCAAGTATGCCAGCCTGAATTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCACTAGAGGATATAGCTGAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATGCACATGCTTATGAGGCCCGGCAAAGAGAGTATGCATTGAAGGGTCATAGGCATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAATGTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTGTTTGCAATGAAGGATATTAAGCAGGATGAAGAAGTGACATTTGATTACAACTATGTAAGGGTTTTTGGCGCTGCTCCCAAAAAATGCTACTGTGGTTCTCCTCATTGCCGAGGTTATATAGGTGGTGGTGATCCACTTGATGACGAAGTGATAGTTCAAGGTGATTCAGATGATGAATTCCCAGAACCTGTGATGCTTACTGTAGACGGTGAAATAAAAAACAGCGTGGCTACACAGTCTGCTAAGCATGTGTTAAAAGAGAGCTATCTATTGAACAAGTCTACAACTTCTGTAGATGTAGATAATATTCCGGAGAAAGAGAGTTGTATGAATCCTACTTCTGCTGTTTCCCTGTTGCACAGATCATCCGAAATGGACATCTCAAAGGACTGGTCACCGTCTTCTGTTCAAGTACAAGAAATTTCTCAACAAATGGAGGATGTAACAGACAAACCCATGCCGGATGTACAACCAGGATATGCAATGGAATCAGATCTTGCAGACAATAAGTCATATACTCAAGAACTAGACTTTACATCCCTTACAACTGTCAGCAAAGTGCTACCAAATTCTACTGGTAGTAATAGGGAATCACATCTGCATGTGAAGGCTCCTAAACGAAGTGTTTCTGTTAAAAAGGGTAAGATTTGTGCTAATCCTCCAAATGGCCTCAAAGCTGTGATTGCCAACCAATCCCAGGTGTCGTCTTTCAAACTAAAAAAAGCAGTTGAAGGAACTTCCAATGGCCGGTTTGAAGCAGTTCAGGAGAAACTTAACGAGTTGCTGGATGGAGATGGGGGAGTAAGCAAAAGAAAAGATGCCACCAAACACTACTTGTTACTTTTGCTTCTCACTGTGGCATCGGGTGATAGGAGCAATGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAACAGTACTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACACAAAATAATGAAGCAGTACAGGCAGGACTTCAAAAAAATACCAATACTACGAAAGCTTCTTAAGGTCTTAGAGTACCTAGCGGAAGGCAAGATATTGACATTTGAACATATCAATAGTGGGCCCCCTTGTCATGGAATGGAGAGTTTTAGGGAATCGATGCTGTCTTTAACAGAGCATGATGACAAAAAGGTCCATCAAATTGCTCGAAGCTTCCGAGACACATGGATTCGTAGGCCTGCCAGAAAACATCATATGGACAGGGATGGTAATAGGGTGGAATCTCGTAGAAGCTTCAACCCTAACAGATTTTCAGCATCATACAACCATAGGCATGAGCAGGATTTGAGACCTACAGAGGTAATTGATTGTCTTCAGCCGCCAACGCCTGTGACAACTTCAGTAGATTCAGGTCCCCAGGAGAGCTGCTCTCCGCTATCTCACGATGGGATGGAAAACAAAGGGATAAAAAAACGTAAGCGCAAAACTCGATGGGATCAACCGGCAGAGACAAACTCATGTCCCATTGTTGTTAGTGGCTCTATTTATGGAGACCAGAGCATTCAGGAGGATGTTCCACCAGGGTTCCCATGTCCTGCAGGTTCATTACCTGCTCCACCGAACTCAGGTGATCCTGCTTCACCGAACTCAGGTGATCCTGCTTCACCGAACTCAGGTGATCCTGCTTCGCAAAATGCATGCCATACTGGATTTTCCTCCAATACAGTCATTGTTCATCCAAAGGAGAAGTTTAACTCTGGCTTGCCTGTCTTATATGGAATGCCATTGTCTGTTGTCCACCAATATGGAACACCTCATGCTGAAATCACAGAGAGTTGGGTCACTGCACCTGGCATGACTTTCAAACCATTTCCTCCATTACCCTCATACTCACGTGATGAGAAAACCTTCCATCCTTCCAGTTCTACTAATGCTATGTCAATTGATCAGCCAGCTGAAGTTAGACAGTGTGATAGCAGTGGTCCAGTTATTTGTTCTGCAGATATGGTTCCCAACACAACTGGTGCTAACTCTGAAGACAAGAACGTTCCATGTGAGGACAATGAACACATTTCTAAACGATTGAAGGGCAACTCCCATGATTTGGGATCAGAGTACTTAAGACAGCAGGAATGGAATAATTCGAAAATATATCGACCGTGGTTTAGGAGGAATGCATGGAAATGTGATGTGAAGTTGAACAACTCAAGTGGTGATATCTGCAGTATAGGTGTAGGAGATGATGTACCAAAACCATCAAAAGGCACATATTCTGAGGATGTAGTCTGTAGAGATGAGAAAGGTGGCAATAATATTTAA 6084 0.4224 MGSCGTSAMVDDLSGGPVAEKQLCSELLVQCVPLQQTCSKEACNELDSNVDVSGLMDYCMGSAVEGHVETASFVNIFEGSGDQLVSECKNADKLLLENTSEDDCQNQSGSCCGNVEVSGLNSGGLYPEGNFQDEGNLDIPSESITVIGLPEHCAQQNERKDDKSNILPLEGDDSALAEARNNGVDLVDDASNCVSVFSHFEMSLKSESIAHLLVDCNQQNDLDDVLRIADPMSKVVGKCVDYGGREADACKQISPSQFMNVSSRALYTEAERTSDQQCDQKDGEDWDSEEKVKAFADIENNIIDSYARKHRNFTTVSLGGSSPVVESHCEPTLLDQGNKMNNSICQIEDSLCELKNCPSEETVNCTLRKPFYPEPGQTSVVIITSSSSKDVHGLLPNGDNVSINNNAVNNPGHTDILEIDCTAERKRLPSQRNSRSTKLGRKTQSKNASRRCKNKANAMHLGGCMLEASRKKRSCISKPARSSMWGLLVNIEQFFEQDNVLGASEAMSQELGTARRKCQSCKVIKSGASSSSLDAVQKCSASNTRFRLRVKIGKEIDLSRSHVLIPETVDALASISYLGCGSGSLKVADTAEEKICEVVALGKSESLKNEPETDAIVLNGQTTNSHLENTSITEKSDGDAEEPCLLVAPKIVVEPTNNKGMDPGTSPDSEVINTIPEDQVGEGHEEYLHHAVFRSSKESSSNLDVTITKRGKKKDNPICASDCISEDGSQGLPKNNRARNSRNPRRKKKSSAALCSSELPTPTEINASRETVTCKDLSAEPLPLSGEVELGHSAGALKVEVEVQTTCKRSVEHEFSESQGSEKFLSPAKSLGHKLPRSLTPIKVSKIKSIASVSTSKKNITHRCNEKQKKLTNKSEVKGKGVLSRVKCELEDHPPTEVNVGNHKLDAVGENNAGENRVSVNVSNLDVVPGAGLGEQHLSPRNAWVRCDDCHKWRRIPAVLADLINETNDTWTCKDNGDKTFADCTIPQEMSNAEINAELGISDEEDAYDDSKNYKQLEYRQPSVSQESNFSCISTNEFLHRSHKTQTIDETVTLKTPLSLRIWDSSWTTEEEGLSATKVIYLVLETRRFDLWLESIASAAADCSDSIMVCHCKPPQEGKLGCGDECLNRILNIECVHGTCPCGDRCSNQQFQKRKYASLNWFKCGKKGYGLKALEDIAEGQFLIEYVGEVLDAHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNVGRFINHSCDPNCRTEKWMVNGEICIGLFAMKDIKQDEEVTFDYNYVRVFGAAPKKCYCGSPHCRGYIGGGDPLDDEVIVQGDSDDEFPEPVMLTVDGEIKNSVATQSAKHVLKESYLLNKSTTSVDVDNIPEKESCMNPTSAVSLLHRSSEMDISKDWSPSSVQVQEISQQMEDVTDKPMPDVQPGYAMESDLADNKSYTQELDFTSLTTVSKVLPNSTGSNRESHLHVKAPKRSVSVKKGKICANPPNGLKAVIANQSQVSSFKLKKAVEGTSNGRFEAVQEKLNELLDGDGGVSKRKDATKHYLLLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRTVLNDIINKNGLQMLHKIMKQYRQDFKKIPILRKLLKVLEYLAEGKILTFEHINSGPPCHGMESFRESMLSLTEHDDKKVHQIARSFRDTWIRRPARKHHMDRDGNRVESRRSFNPNRFSASYNHRHEQDLRPTEVIDCLQPPTPVTTSVDSGPQESCSPLSHDGMENKGIKKRKRKTRWDQPAETNSCPIVVSGSIYGDQSIQEDVPPGFPCPAGSLPAPPNSGDPASPNSGDPASPNSGDPASQNACHTGFSSNTVIVHPKEKFNSGLPVLYGMPLSVVHQYGTPHAEITESWVTAPGMTFKPFPPLPSYSRDEKTFHPSSSTNAMSIDQPAEVRQCDSSGPVICSADMVPNTTGANSEDKNVPCEDNEHISKRLKGNSHDLGSEYLRQQEWNNSKIYRPWFRRNAWKCDVKLNNSSGDICSIGVGDDVPKPSKGTYSEDVVCRDEKGGNNI 2027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0500 2027 ProSiteProfiles SET domain profile. 1149 1274 IPR001214 GO:0005515
Lal17g0500 2027 Gene3D SET domain 1087 1306 IPR046341 -
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1785 1801 - -
Lal17g0500 2027 SMART PostSET_3 1282 1298 IPR003616 -
Lal17g0500 2027 PANTHER SET DOMAIN PROTEINS 434 1951 - -
Lal17g0500 2027 ProSiteProfiles Post-SET domain profile. 1282 1298 IPR003616 -
Lal17g0500 2027 Gene3D - 941 1001 - -
Lal17g0500 2027 SUPERFAMILY SET domain 1103 1295 IPR046341 -
Lal17g0500 2027 SMART shorttest3 1105 1156 IPR006560 GO:0005634|GO:0018024
Lal17g0500 2027 MobiDBLite consensus disorder prediction 423 449 - -
Lal17g0500 2027 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 434 1951 - -
Lal17g0500 2027 Pfam AWS domain 1120 1154 IPR006560 GO:0005634|GO:0018024
Lal17g0500 2027 ProSiteProfiles AWS domain profile. 1105 1155 IPR006560 GO:0005634|GO:0018024
Lal17g0500 2027 ProSiteProfiles Zinc finger CW-type profile. 938 992 IPR011124 GO:0008270
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1756 1774 - -
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1671 1693 - -
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1802 1823 - -
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1716 1735 - -
Lal17g0500 2027 Pfam CW-type Zinc Finger 944 989 IPR011124 GO:0008270
Lal17g0500 2027 Pfam SET domain 1168 1274 IPR001214 GO:0005515
Lal17g0500 2027 SMART set_7 1157 1280 IPR001214 GO:0005515
Lal17g0500 2027 CDD SET_SETD2 1156 1298 IPR044437 GO:0010452|GO:0046975
Lal17g0500 2027 MobiDBLite consensus disorder prediction 692 756 - -
Lal17g0500 2027 MobiDBLite consensus disorder prediction 1716 1823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0500 Lal-Chr17 3464394 3478440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0500 1140 1297 C2H2 Transcription Factor Family AT2G23740 33.714 1.27e-19 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal17g0500 SET 9.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0500 - - gmx:100795379 2193.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0500 17 3464394 3478440 Lal17g0500 17 3464394 3478440 ECH
Lal17g0500 17 3464394 3478440 Lal21g0531 21 3852890 3866515 LSH
Lal17g0500 17 3464394 3478440 Lal4g0432 4 3018454 3033107 LSH