Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0487 ATGTTTACCCGAACCAGGAATTTCTCATCGTCATCGCCATCTTCTTCATCATCGGAGAAGAAGAAGGTCACTGCCGCGAAGAAATCTCAAACGACAAGGAAGCGCCCTCCTCTCACTGACGTAACCAATAAGAGAAATGCCTCTCTCTGCGGTGCAAGGAATTTCGTTGCTCCTTCATCCATGCCTTTGACTGCCAATGTTTGTTTGAAGGTTCCATGCACGTCTAAAGCTGCCAAGGCAAAGAAGGACTTAATTGGCAGTTCTCAGAAGAAGGATTCTATCGCGAGTTCTCAGAGAAAGGATTCTATTACAAGTTCTCCGAGAAAGGATTCTATTGCAAGTTCTCAGAGAAAGGATTCTATTGCAAGTTCTCAGAAAAATAATTCTATTGCCAGTTCTCAGAAAAAGGATTCTATTGCCAGTTCTCAGAAAAAAAATATGTCCGGGGACACTTTGCTAGCATCATTGAGCACAAAATTAAGTGGGTTTGTGCTTTCTGAAGGCACGCGTTCAACCAGAAGTAGTCAACTTAAGGCTGGAGTTCAACCTTTCCTTGCTAATATGGTCTGTGCTTCAAGAAGGAAGAGCCTTTCTCCAAGTAAATCCTTCAGCAGTTCAGTTTCACTAGATGAGAGTATGTCAACCAGTGATTCATTGAAAAGTCCTGAATTTGAATATATTGACAATTATGATGTCGTATCTACCAAGTACATTGAGAATAGGACATCTAGCATTCTCAATATTTCAGACTCTTCAAAAATATCAGGGAGAATATACGGTGGTGATACCGTCGTGAAGACAGAAGAAACAAATGAAGTTGTGGATATTGACAACAATATCAAAGACCCACAATTCTGTGCGTCAATTGCCCATGAAATCTATGAACATTTGCGTGCATGTGAGGAAATTAGAAGGCCATCTATGGATTTTATGCACAAAACACAGAAAGATATTGATGCTAGCATGCGGGCAGTACTTATTGATTGGCTTGTGGAGGTTTCTGAAGAGTACAGGCTTGTACCTGATACACTATTTTTGACAGTTAACTACATGGATCGCTATCTTTCTAGCCATTCAATTAATAGGAAGCAATTACAGCTACTTGGCGTTGCCTGCATGAGGGTTGCTGCCAAATACGAGGAGATCTGTGCCCCTGAGGTGCAAGAGTTCTGTGATATAACTGATAATACATATTCCAAGGAGCAGGTTTTGCACATGGAATCTGCTGTACTGAATTCCTTGAAGTTTGAAATGTCAGCCCCAACAGTTAATAGTTTTTTGAGGCGCTTCGTTATTGTTGCCCAACGCACTTGTGAGGTTCCGTCGCTGCATTTGGAGTATTTGGCAGCTTATCTCGCAGAGCTGTCTCTTCTAGAGTATGCTATGCTCAAGTACACCCCATCACTAGTAGCTGCATCAACCACTTTTTTGGCTACATACATTTTACTTCTTCCTCGGAAGAAACCTTGGAATTCTACACTTAGGTATTACACTGGCTACCAAGCACCAGAACTGCAGGAATGTGTCATGGTATTGCATTGGGTGTGCTGCAATGGCTATCATACATTGCCTGCCATCAGGGAGAAATACAGTCAGCATAAGTTCAAGTTCGTGGCAAAGAAGTACTGTCCTCTGTCAATACCACCAGAGGTGTTCCAGAACTAG 1665 0.4204 MFTRTRNFSSSSPSSSSSEKKKVTAAKKSQTTRKRPPLTDVTNKRNASLCGARNFVAPSSMPLTANVCLKVPCTSKAAKAKKDLIGSSQKKDSIASSQRKDSITSSPRKDSIASSQRKDSIASSQKNNSIASSQKKDSIASSQKKNMSGDTLLASLSTKLSGFVLSEGTRSTRSSQLKAGVQPFLANMVCASRRKSLSPSKSFSSSVSLDESMSTSDSLKSPEFEYIDNYDVVSTKYIENRTSSILNISDSSKISGRIYGGDTVVKTEETNEVVDIDNNIKDPQFCASIAHEIYEHLRACEEIRRPSMDFMHKTQKDIDASMRAVLIDWLVEVSEEYRLVPDTLFLTVNYMDRYLSSHSINRKQLQLLGVACMRVAAKYEEICAPEVQEFCDITDNTYSKEQVLHMESAVLNSLKFEMSAPTVNSFLRRFVIVAQRTCEVPSLHLEYLAAYLAELSLLEYAMLKYTPSLVAASTTFLATYILLLPRKKPWNSTLRYYTGYQAPELQECVMVLHWVCCNGYHTLPAIREKYSQHKFKFVAKKYCPLSIPPEVFQN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0487 554 MobiDBLite consensus disorder prediction 30 45 - -
Lal17g0487 554 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g0487 554 CDD CYCLIN 421 513 IPR013763 -
Lal17g0487 554 Pfam Cyclin, C-terminal domain 421 540 IPR004367 -
Lal17g0487 554 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 23 553 - -
Lal17g0487 554 PANTHER CYCLINS 23 553 IPR039361 -
Lal17g0487 554 MobiDBLite consensus disorder prediction 1 45 - -
Lal17g0487 554 MobiDBLite consensus disorder prediction 80 144 - -
Lal17g0487 554 ProSitePatterns Cyclins signature. 323 354 IPR006671 -
Lal17g0487 554 SUPERFAMILY Cyclin-like 421 544 IPR036915 -
Lal17g0487 554 CDD CYCLIN 322 411 IPR013763 -
Lal17g0487 554 MobiDBLite consensus disorder prediction 89 144 - -
Lal17g0487 554 Gene3D - 292 540 - -
Lal17g0487 554 SMART cyclin_7 328 412 IPR013763 -
Lal17g0487 554 SMART cyclin_7 425 514 IPR013763 -
Lal17g0487 554 SUPERFAMILY Cyclin-like 281 418 IPR036915 -
Lal17g0487 554 PIRSF Cyclin_A_B_D_E 157 551 IPR039361 -
Lal17g0487 554 PIRSF Cyclin_A_B_D_E 2 171 IPR039361 -
Lal17g0487 554 Pfam Cyclin, N-terminal domain 292 419 IPR006671 -
Lal17g0487 554 Gene3D - 306 419 - -
Lal17g0487 554 SMART Cyclin_C_2 421 544 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0487 Lal-Chr17 3365595 3371485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0487 198 554 Core Cell Cycle Gene Families AT1G44110 58.611 2.58e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0487 K06627 - qsu:112028128 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0487 17 3365595 3371485 Lal17g0487 17 3365595 3371485 ECH